Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

50,469
Anise annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

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1,943 genes for “transcription factor”

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Chr05.g41854Chr05.g41854.m1

…//intracellular part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding | K12125 | ELF3 | RWR82745.1 protein HEADING DATE 3B [Cinnamomum micranthum f. kanehirae] | Q657D6.2 RecName: Full=ELF3-like protein 2 [Oryza sativa …

Show annotation evidence
eggNOG
4432.XP_010244364.1,S,[Protein EARLY FLOWERING]
GO
Protein EARLY FLOWERING | GO:0000003//reproduction; GO:0000902//cell morphogenesis; GO:0001101//response to acid chemical; GO:0003006//developmental process involved in reproduction; GO:0006355//regulation of transcription, DNA-templated; GO:0006950//response to stress; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0007275//multicellular organism development; GO:0007602//phototransduction; GO...
KEGG
K12125 | ELF3
NR
RWR82745.1 protein HEADING DATE 3B [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q657D6.2 RecName: Full=ELF3-like protein 2 [Oryza sativa Japonica Group]
eggNOGGOKEGGNRSwiss-Prot
eggNOG-inferred
Chr05.g41867Chr05.g41867.m1

…olecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0044212//transcription regulatory region DNA binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic …

Show annotation evidence
eggNOG
4432.XP_010267036.1,K,[dof zinc finger protein]
GO
dof zinc finger protein | GO:0006355//regulation of transcription, DNA-templated; GO:0008150//biological_process; GO:0009889//regulation of biosynthetic process; GO:0010033//response to organic substance; GO:0010200//response to chitin; GO:0010243//response to organonitrogen compound; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of...
NR
RWR82735.1 zinc finger protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
O82155.1 RecName: Full=Dof zinc finger protein DOF1.7; Short=AtDOF1.7 [Arabidopsis thaliana]
eggNOGGONRSwiss-Prot
eggNOG-inferred
Chr05.g41875Chr05.g41875.m1

Chr05.g41875.m1 | Chr05.g41875 | 4432.XP_010266999.1,K,[transcription factor] | RWR82728.1 transcription factor MYB1R1-like protein isoform X2 [Cinnamomum micranthum f. kanehirae] | Q7XC57.1 RecName: Full=Transcription factor MYBS3; AltName: Full=Myb-related protein S3; Short=OsMYBS3 [Oryza sativa J…

Show annotation evidence
eggNOG
4432.XP_010266999.1,K,[transcription factor]
NR
RWR82728.1 transcription factor MYB1R1-like protein isoform X2 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q7XC57.1 RecName: Full=Transcription factor MYBS3; AltName: Full=Myb-related protein S3; Short=OsMYBS3 [Oryza sativa Japonica Group]
eggNOGNRSwiss-Prot
eggNOG-inferred
Chr05.g41878Chr05.g41878.m1

…olecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0003723//RNA binding; GO:0003727//single-stranded RNA binding; GO:0005488//binding; GO:0008270//zinc ion binding; GO:0043167//ion binding; GO:004…

Show annotation evidence
eggNOG
4432.XP_010244375.1,S,[zinc finger CCCH domain-containing protein]
GO
zinc finger CCCH domain-containing protein | GO:0001101//response to acid chemical; GO:0006355//regulation of transcription, DNA-templated; GO:0006417//regulation of translation; GO:0006950//response to stress; GO:0006979//response to oxidative stress; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0007275//multicellular organism development; GO:0007568//aging; GO:0008150//biological_process;...
KEGG
K23048 | UNK
NR
RWR82725.1 zinc finger protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
O82199.1 RecName: Full=Zinc finger CCCH domain-containing protein 20; Short=AtC3H20 [Arabidopsis thaliana]
eggNOGGOKEGGNRSwiss-Prot
eggNOG-inferred
Chr05.g41882Chr05.g41882.m1

Chr05.g41882.m1 | Chr05.g41882 | 4432.XP_010267089.1,K,[transcription factor] | K09422 | MYBP | RWR82724.1 transcription repressor MYB6-like protein [Cinnamomum micranthum f. kanehirae] | Q9SJL7.1 RecName: Full=Transcription factor RAX2; AltName: Full=Myb-related protein 38; Short=AtMYB38; AltName: …

Show annotation evidence
eggNOG
4432.XP_010267089.1,K,[transcription factor]
KEGG
K09422 | MYBP
NR
RWR82724.1 transcription repressor MYB6-like protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9SJL7.1 RecName: Full=Transcription factor RAX2; AltName: Full=Myb-related protein 38; Short=AtMYB38; AltName: Full=Protein REGULATOR OF AXILLARY MERISTEMS 2 [Arabidopsis thaliana]
eggNOGKEGGNRSwiss-Prot
eggNOG-inferred
Chr05.g41887Chr05.g41887.m2

…olecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0043565//sequence-specific DNA binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound bindi…

Show annotation evidence
eggNOG
4432.XP_010244406.1,K,[(NAC) domain-containing protein]
GO
(NAC) domain-containing protein | GO:0000075//cell cycle checkpoint; GO:0000077//DNA damage checkpoint; GO:0006355//regulation of transcription, DNA-templated; GO:0006950//response to stress; GO:0006974//cellular response to DNA damage stimulus; GO:0008150//biological_process; GO:0009314//response to radiation; GO:0009628//response to abiotic stimulus; GO:0009889//regulation of biosynthetic process; GO:0009987/...
NR
RWR82718.1 NAC family protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9M0F8.1 RecName: Full=NAC domain-containing protein 75; Short=ANAC075 [Arabidopsis thaliana]
eggNOGGONRSwiss-Prot
eggNOG-inferred
Chr05.g41910Chr05.g41910.m1

Chr05.g41910.m1 | Chr05.g41910 | 4432.XP_010267150.1,K,[transcription factor] | RWR82702.1 SANT/Myb domain-containing protein [Cinnamomum micranthum f. kanehirae] | Q7XC57.1 RecName: Full=Transcription factor MYBS3; AltName: Full=Myb-related protein S3; Short=OsMYBS3 [Oryza sativa Japonica Group]

Show annotation evidence
eggNOG
4432.XP_010267150.1,K,[transcription factor]
NR
RWR82702.1 SANT/Myb domain-containing protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q7XC57.1 RecName: Full=Transcription factor MYBS3; AltName: Full=Myb-related protein S3; Short=OsMYBS3 [Oryza sativa Japonica Group]
eggNOGNRSwiss-Prot
eggNOG-inferred
Chr05.g41914Chr05.g41914.m1

…1 RecName: Full=Protein SAWADEE HOMEODOMAIN HOMOLOG 2; AltName: Full=Probable DNA-binding transcription factor 2 [Arabidopsis thaliana]

Show annotation evidence
eggNOG
3659.XP_004136226.1,S,[Protein SAWADEE HOMEODOMAIN HOMOLOG]
NR
KAF8393433.1 hypothetical protein HHK36_021677 [Tetracentron sinense]
Swiss-Prot
Q8RWJ7.1 RecName: Full=Protein SAWADEE HOMEODOMAIN HOMOLOG 2; AltName: Full=Probable DNA-binding transcription factor 2 [Arabidopsis thaliana]
eggNOGNRSwiss-Prot
eggNOG-inferred
Chr05.g41917Chr05.g41917.m1

…; GO:0070013//intracellular organelle lumen | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding | K09272 | SSRP1 | RWR82699.1 FACT complex subunit SSRP1 [Cinnamomum micranthum f. kanehirae] | O04235.1 RecName: Full=FACT complex subunit SSRP1; Al…

Show annotation evidence
eggNOG
13333.ERN03798,BKL,[Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage...
GO
Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II...
KEGG
K09272 | SSRP1
NR
RWR82699.1 FACT complex subunit SSRP1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
O04235.1 RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 [Vicia faba]
eggNOGGOKEGGNRSwiss-Prot
eggNOG-inferred
Chr05.g41921Chr05.g41921.m1

…_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005667//transcription factor complex; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded o…

Show annotation evidence
eggNOG
4432.XP_010249552.1,K,[Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters]
GO
Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters | GO:0006139//nucleobase-containing compound metabolic process; GO:0006351//transcription, DNA-templated; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006366//transcription from RNA polymerase II promoter; GO:0006725/...
NR
RWR82696.1 GATA transcription factor 12 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
P69781.1 RecName: Full=GATA transcription factor 12 [Arabidopsis thaliana]
eggNOGGONRSwiss-Prot
eggNOG-inferred
Chr05.g41941Chr05.g41941.m1

Chr05.g41941.m1 | Chr05.g41941 | RWR82681.1 trihelix transcription factor ASR3 [Cinnamomum micranthum f. kanehirae]

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NR
RWR82681.1 trihelix transcription factor ASR3 [Cinnamomum micranthum f. kanehirae]
NR
eggNOG-inferred
Chr05.g41949Chr05.g41949.m1

…olecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding | RWR82674.1 auxin response factor 19-li…

Show annotation evidence
eggNOG
4432.XP_010263344.1,K,[Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)]
GO
Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs) | GO:0006355//regulation of transcription, DNA-templated; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0009314//response to radiation; GO...
NR
RWR82674.1 auxin response factor 19-like protein isoform X1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q0D9R7.2 RecName: Full=Auxin response factor 19; AltName: Full=OsARF7a [Oryza sativa Japonica Group]
eggNOGGONRSwiss-Prot
eggNOG-inferred
Chr05.g41973Chr05.g41973.m1

Chr05.g41973.m1 | Chr05.g41973 | 225117.XP_009348093.1,K,[transcription factor] | transcription factor | GO:0006355//regulation of transcription, DNA-templated; GO:0008150//biological_process; GO:0009889//regulation of biosynthetic process; GO:0010468//regulation of gene expression; GO:0010556//regu…

Show annotation evidence
eggNOG
225117.XP_009348093.1,K,[transcription factor]
GO
transcription factor | GO:0006355//regulation of transcription, DNA-templated; GO:0008150//biological_process; GO:0009889//regulation of biosynthetic process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0031323//regulation of...
NR
RWR82648.1 transcription factor bHLH35-like protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q2HIV9.1 RecName: Full=Transcription factor bHLH35; AltName: Full=Basic helix-loop-helix protein 35; Short=AtbHLH35; Short=bHLH 35; AltName: Full=Transcription factor EN 41; AltName: Full=bHLH transcription factor bHLH035 [Arabidopsis thaliana]
eggNOGGONRSwiss-Prot
eggNOG-inferred
Chr05.g41974Chr05.g41974.m1

Chr05.g41974.m1 | Chr05.g41974 | 42345.XP_008811434.1,K,[GATA transcription factor] | GATA transcription factor | GO:0006139//nucleobase-containing compound metabolic process; GO:0006351//transcription, DNA-templated; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of …

Show annotation evidence
eggNOG
42345.XP_008811434.1,K,[GATA transcription factor]
GO
GATA transcription factor | GO:0006139//nucleobase-containing compound metabolic process; GO:0006351//transcription, DNA-templated; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006366//transcription from RNA polymerase II promoter; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic...
NR
RWR82647.1 GATA transcription factor 20-like protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q5Z4U5.1 RecName: Full=GATA transcription factor 20; Short=OsGATA20; AltName: Full=Protein TIFY 2b; Short=OsTIFY2b [Oryza sativa Japonica Group]
eggNOGGONRSwiss-Prot
eggNOG-inferred
Chr05.g41988Chr05.g41988.m1

…/regulation of RNA biosynthetic process | - | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding | K09338 | HD-ZIP | RWR75268.1 Homeobox domain-containing protein [Cinnamomum micranthum f. kanehirae] | P46604.1 RecName: Full=Homeobox-leucine zipp…

Show annotation evidence
eggNOG
42345.XP_008801538.1,K,[homeobox associated leucin zipper]
GO
homeobox associated leucin zipper | GO:0006355//regulation of transcription, DNA-templated; GO:0008150//biological_process; GO:0009889//regulation of biosynthetic process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0031323/...
KEGG
K09338 | HD-ZIP
NR
RWR75268.1 Homeobox domain-containing protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
P46604.1 RecName: Full=Homeobox-leucine zipper protein HAT22; AltName: Full=Homeodomain-leucine zipper protein HAT22; Short=HD-ZIP protein 22 [Arabidopsis thaliana]
eggNOGGOKEGGNRSwiss-Prot
eggNOG-inferred
Chr05.g41989Chr05.g41989.m1

…/regulation of RNA biosynthetic process | - | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding | K09338 | HD-ZIP | RWR82629.1 ABC transporter F family member 4-like protein [Cinnamomum micranthum f. kanehirae] | P46665.3 RecName: Full=Homeobox-…

Show annotation evidence
eggNOG
42345.XP_008801538.1,K,[homeobox associated leucin zipper]
GO
homeobox associated leucin zipper | GO:0006355//regulation of transcription, DNA-templated; GO:0008150//biological_process; GO:0009889//regulation of biosynthetic process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0031323/...
KEGG
K09338 | HD-ZIP
NR
RWR82629.1 ABC transporter F family member 4-like protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
P46665.3 RecName: Full=Homeobox-leucine zipper protein HAT14; AltName: Full=Homeodomain-leucine zipper protein HAT14; Short=HD-ZIP protein 14 [Arabidopsis thaliana]
eggNOGGOKEGGNRSwiss-Prot
eggNOG-inferred
Chr05.g41997Chr05.g41997.m1

Chr05.g41997.m1 | Chr05.g41997 | 42345.XP_008804904.1,S,[Transcription factor transcription regulator] | Transcription factor transcription regulator | GO:0006355//regulation of transcription, DNA-templated; GO:0008150//biological_process; GO:0009889//regulation of biosynthetic process; GO:0010468//…

Show annotation evidence
eggNOG
42345.XP_008804904.1,S,[Transcription factor transcription regulator]
GO
Transcription factor transcription regulator | GO:0006355//regulation of transcription, DNA-templated; GO:0008150//biological_process; GO:0009889//regulation of biosynthetic process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO...
NR
RWR82622.1 hypothetical protein CKAN_01135000 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9SUM5.1 RecName: Full=Transcription factor bHLH146; AltName: Full=Basic helix-loop-helix protein 146; Short=AtbHLH146; Short=bHLH 146; AltName: Full=Transcription factor EN 141; AltName: Full=bHLH transcription factor bHLH146 [Arabidopsis thaliana]
eggNOGGONRSwiss-Prot
eggNOG-inferred
Chr05.g42007Chr05.g42007.m1

Chr05.g42007.m1 | Chr05.g42007 | 218851.Aquca_068_00041.1,K,[transcription factor] | transcription factor | GO:0001101//response to acid chemical; GO:0001704//formation of primary germ layer; GO:0001706//endoderm formation; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulati…

Show annotation evidence
eggNOG
218851.Aquca_068_00041.1,K,[transcription factor]
GO
transcription factor | GO:0001101//response to acid chemical; GO:0001704//formation of primary germ layer; GO:0001706//endoderm formation; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0007275//multicellular organism development; GO:0007369//gastrulation; GO:0007492//endoderm development; GO:0008150//biological_process; GO...
KEGG
K09422 | MYBP
NR
RWR82612.1 Myb domain-containing protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9FKL2.1 RecName: Full=Transcription factor MYB36; AltName: Full=Myb-related protein 36; Short=AtMYB36 [Arabidopsis thaliana]
eggNOGGOKEGGNRSwiss-Prot
eggNOG-inferred
Chr05.g42011Chr05.g42011.m1

…003824//catalytic activity; GO:0005488//binding; GO:0005515//protein binding; GO:0008134//transcription factor binding; GO:0016462//pyrophosphatase activity; GO:0016787//hydrolase activity; GO:0016817//hydrolase activity, acting on acid anhydrides; GO:0016818//hydrolase activity, acting on acid anhy…

Show annotation evidence
eggNOG
4432.XP_010245668.1,O,[Belongs to the AAA ATPase family]
GO
Belongs to the AAA ATPase family | GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006508//proteolysis; GO:0006511//ubiquitin-dependent protein catabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009056//catabolic...
KEGG
K03062 | PSMC1, RPT2
NR
RWR82609.1 AAA+ ATPase domain-containing protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
P46466.2 RecName: Full=26S proteasome regulatory subunit 4 homolog; AltName: Full=Tat-binding protein homolog 2 [Oryza sativa Japonica Group]
eggNOGGOKEGGNRSwiss-Prot
eggNOG-inferred
Chr05.g42035Chr05.g42035.m1

…//intracellular part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding | RWR82600.1 zinc finger protein CONSTANS-LIKE 5 [Cinnamomum micranthum f. kanehirae] | Q9FHH8.2 RecName: Full=Zinc finger protein CONSTANS-LIKE 5 [A…

Show annotation evidence
eggNOG
2711.XP_006474138.1,K,[Zinc finger protein CONSTANS-like]
GO
Zinc finger protein CONSTANS-like | GO:0006355//regulation of transcription, DNA-templated; GO:0008150//biological_process; GO:0009314//response to radiation; GO:0009416//response to light stimulus; GO:0009628//response to abiotic stimulus; GO:0009889//regulation of biosynthetic process; GO:0009909//regulation of flower development; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule...
NR
RWR82600.1 zinc finger protein CONSTANS-LIKE 5 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9FHH8.2 RecName: Full=Zinc finger protein CONSTANS-LIKE 5 [Arabidopsis thaliana]
eggNOGGONRSwiss-Prot
eggNOG-inferred
Chr05.g42075Chr05.g42075.m1

Chr05.g42075.m1 | Chr05.g42075 | 29760.VIT_03s0063g02590.t01,K,[mTERF] | mTERF | GO:0006139//nucleobase-containing compound metabolic process; GO:0006396//RNA processing; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen...

Show annotation evidence
eggNOG
29760.VIT_03s0063g02590.t01,K,[mTERF]
GO
mTERF | GO:0006139//nucleobase-containing compound metabolic process; GO:0006396//RNA processing; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006996//organelle organization; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008380//RNA splicing; GO:0009657//plastid organization; GO:0009658//chloroplast organization; GO:0009987/...
KEGG
K15032 | MTERFD
NR
RWR82590.1 transcription termination factor MTERF2, chloroplastic isoform X2 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
F4IHL3.1 RecName: Full=Transcription termination factor MTERF2, chloroplastic; AltName: Full=Mitochondrial transcription termination factor 2; AltName: Full=Protein EMBRYO DEFECTIVE 2219; Flags: Precursor [Arabidopsis thaliana]
eggNOGGOKEGGNRSwiss-Prot
eggNOG-inferred
Chr05.g42079Chr05.g42079.m1

…the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors] | Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey informatio…

Show annotation evidence
eggNOG
29760.VIT_06s0004g00450.t01,K,[Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a...
GO
Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a...
KEGG
K15164 | MED13
NR
OVA06369.1 Mediator complex [Macleaya cordata]
Swiss-Prot
F4I096.1 RecName: Full=Mediator of RNA polymerase II transcription subunit 13; AltName: Full=Protein GRAND CENTRAL; AltName: Full=Protein MACCHI-BOU 2 [Arabidopsis thaliana]
eggNOGGOKEGGNRSwiss-Prot
eggNOG-inferred
Chr05.g42093Chr05.g42093.m1

Chr05.g42093.m1 | Chr05.g42093 | 42345.XP_008778954.1,K,[WRKY transcription factor 4] | RWR82574.1 putative WRKY transcription factor 4 [Cinnamomum micranthum f. kanehirae] | Q9XI90.2 RecName: Full=Probable WRKY transcription factor 4; AltName: Full=WRKY DNA-binding protein 4 [Arabidopsis thaliana]

Show annotation evidence
eggNOG
42345.XP_008778954.1,K,[WRKY transcription factor 4]
NR
RWR82574.1 putative WRKY transcription factor 4 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9XI90.2 RecName: Full=Probable WRKY transcription factor 4; AltName: Full=WRKY DNA-binding protein 4 [Arabidopsis thaliana]
eggNOGNRSwiss-Prot
eggNOG-inferred
Chr05.g42098Chr05.g42098.m1

Chr05.g42098.m1 | Chr05.g42098 | 218851.Aquca_016_00214.1,K,[WRKY Transcription Factor] | WRKY Transcription Factor | GO:0001101//response to acid chemical; GO:0002237//response to molecule of bacterial origin; GO:0006355//regulation of transcription, DNA-templated; GO:0006950//response to stress; G…

Show annotation evidence
eggNOG
218851.Aquca_016_00214.1,K,[WRKY Transcription Factor]
GO
WRKY Transcription Factor | GO:0001101//response to acid chemical; GO:0002237//response to molecule of bacterial origin; GO:0006355//regulation of transcription, DNA-templated; GO:0006950//response to stress; GO:0006952//defense response; GO:0008150//biological_process; GO:0009605//response to external stimulus; GO:0009607//response to biotic stimulus; GO:0009611//response to wounding; GO:0009617//response to...
NR
RWR82572.1 WRKY transcription factor WRKY76-like protein isoform X2 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9SAH7.1 RecName: Full=Probable WRKY transcription factor 40; AltName: Full=WRKY DNA-binding protein 40 [Arabidopsis thaliana]
eggNOGGONRSwiss-Prot
eggNOG-inferred
Chr05.g42163Chr05.g42163.m1

Chr05.g42163.m1 | Chr05.g42163 | 4432.XP_010261923.1,P,[RNA polymerase-associated protein CTR9 homolog] | RNA polymerase-associated protein CTR9 homolog | GO:0000122//negative regulation of transcription from RNA polymerase II promoter; GO:0006325/...

Show annotation evidence
eggNOG
4432.XP_010261923.1,P,[RNA polymerase-associated protein CTR9 homolog]
GO
RNA polymerase-associated protein CTR9 homolog | GO:0000122//negative regulation of transcription from RNA polymerase II promoter; GO:0006325//chromatin organization; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006464//cellular protein modification process; GO:0006479//protein methylation; GO:0006807//nitrogen compound...
KEGG
K15176 | CTR9
NR
RWR82534.1 Tetratricopeptide TPR-1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
B5X0I6.1 RecName: Full=Protein CTR9 homolog; AltName: Full=Protein EARLY FLOWERING 8; AltName: Full=Protein VERNALIZATION INDEPENDENCE 6 [Arabidopsis thaliana]
eggNOGGOKEGGNRSwiss-Prot
eggNOG-inferred
Chr05.g42174Chr05.g42174.m1

…id binding; GO:0003677//DNA binding; GO:0003690//double-stranded DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0043565//sequence-specific DNA binding; GO:0044212//transcription regulatory region DNA binding; GO:0097159//organic cyclic …

Show annotation evidence
eggNOG
42345.XP_008776870.1,K,[RNA polymerase II regulatory region DNA binding]
GO
RNA polymerase II regulatory region DNA binding | GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0009791//post-embryonic development; GO:0009889//regulation of biosynthetic process; GO:0010468//regulation of gene expression; GO:0010556//regulation of...
NR
RWR75654.1 zinc finger BED domain-containing protein RICESLEEPER 2-like protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
B9FJG3.1 RecName: Full=Zinc finger BED domain-containing protein RICESLEEPER 1; AltName: Full=Transposase-like protein RICESLEEPER 1 [Oryza sativa Japonica Group]
eggNOGGONRSwiss-Prot
eggNOG-inferred
Chr05.g42190Chr05.g42190.m1

Chr05.g42190.m1 | Chr05.g42190 | 4432.XP_010278209.1,K,[Trihelix transcription factor] | RWR82516.1 trihelix transcription factor PTL [Cinnamomum micranthum f. kanehirae] | Q9LZS0.1 RecName: Full=Trihelix transcription factor PTL; AltName: Full=Trihelix DNA-binding protein PETAL LOSS [Arabidopsis th…

Show annotation evidence
eggNOG
4432.XP_010278209.1,K,[Trihelix transcription factor]
NR
RWR82516.1 trihelix transcription factor PTL [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9LZS0.1 RecName: Full=Trihelix transcription factor PTL; AltName: Full=Trihelix DNA-binding protein PETAL LOSS [Arabidopsis thaliana]
eggNOGNRSwiss-Prot
eggNOG-inferred
Chr05.g42228Chr05.g42228.m2

…inding; GO:0001067//regulatory region nucleic acid binding; GO:0001085//RNA polymerase II transcription factor binding; GO:0001103//RNA polymerase II repressing transcription factor binding; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003678//DNA he…

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eggNOG
4432.XP_010253775.1,S,[Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger protein]
GO
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger protein | GO:0000122//negative regulation of transcription from RNA polymerase II promoter; GO:0006325//chromatin organization; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006464//cellular protein modification process; GO:0006476//protein deacetylation; GO:0006807/...
NR
RWR82472.1 chromodomain-containing protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
F4IXE7.1 RecName: Full=Increased DNA methylation 1; AltName: Full=Histone H3 acetyltransferase IDM1; AltName: Full=Protein ROS4; AltName: Full=Repressor of silencing 4 [Arabidopsis thaliana]
eggNOGGONRSwiss-Prot
eggNOG-inferred
Chr05.g42238Chr05.g42238.m1

…/regulation of RNA biosynthetic process | - | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding | RWR72111.1 NAC transcription factor 29-like protein [Cinnamomum micranthum f. kanehirae] | A0SPJ4.1 RecName: Full=NAC transcription factor NAM-B1; …

Show annotation evidence
eggNOG
28532.XP_010533895.1,K,[No apical meristem (NAM) protein]
GO
No apical meristem (NAM) protein | GO:0000003//reproduction; GO:0003006//developmental process involved in reproduction; GO:0006355//regulation of transcription, DNA-templated; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0009555//pollen development; GO:0009790//embryo development; GO:0009791//post-embryonic development; GO:0009793//embryo development ending in seed dormancy;...
NR
RWR72111.1 NAC transcription factor 29-like protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
A0SPJ4.1 RecName: Full=NAC transcription factor NAM-B1; Short=TtNAM-B1 [Triticum dicoccoides]
eggNOGGONRSwiss-Prot
eggNOG-inferred
Chr05.g42250Chr05.g42250.m1

Chr05.g42250.m1 | Chr05.g42250 | 218851.Aquca_017_00066.1,K,[Transcription factor] | Transcription factor | GO:0000902//cell morphogenesis; GO:0000904//cell morphogenesis involved in differentiation; GO:0006139//nucleobase-containing compound metabolic process; GO:0006351//transcription, DNA-templat…

Show annotation evidence
eggNOG
218851.Aquca_017_00066.1,K,[Transcription factor]
GO
Transcription factor | GO:0000902//cell morphogenesis; GO:0000904//cell morphogenesis involved in differentiation; GO:0006139//nucleobase-containing compound metabolic process; GO:0006351//transcription, DNA-templated; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006366//transcription from RNA polymerase II promoter; GO:0006725...
NR
KAF8404894.1 hypothetical protein HHK36_009789 [Tetracentron sinense]
Swiss-Prot
Q7XHI9.1 RecName: Full=Transcription factor bHLH84; AltName: Full=Basic helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH 84; AltName: Full=bHLH transcription factor bHLH084 [Arabidopsis thaliana]
eggNOGGONRSwiss-Prot
eggNOG-inferred

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