PerseaDB resource center
Explore data and analysis tools
Move from avocado genome collections to biological records, sequence analysis, interactive chromosome views, transcriptomics results, and reusable downloads.
- 3
- cultivars
- 133,540
- genes
- 145,740
- proteins
Data and tools
Choose where to begin
Every section below connects to real PerseaDB content. Search individual records, inspect whole chromosomes, run sequence comparisons, or download source datasets.
01Search biological dataFind published genes, mRNAs, proteins, and organism records.Open data search 02Species and cultivarsExplore Hass, West Indian T2T, and Anise genome collections and record counts.Browse species 03Database downloadsDownload the available genome, annotation, transcript, CDS, and protein files.Browse downloads 04Genome browserNavigate Hass, West Indian, and Anise assemblies, genes, transcripts, and CDS tracks.Open JBrowse 05Comparative genomicsExplore phylogeny, gene families, synteny, structural variation, and Lauraceae ancestral chromosomes.Explore comparisons 06TranscriptomicsBrowse cultivar-specific RNA-seq analysis projects and result figures.Explore transcriptomics 07Functional annotation searchFind genes by annotation terms such as fatty acid, lipid metabolism, or transcription factor.Search annotations 08GO enrichmentTest a submitted gene list against the available cultivar-specific Gene Ontology background.Run GO enrichment 09PCR primer designDesign PCR primer pairs with Primer3 when the local analysis engine is available.Design primers 10Gene workspaceFollow one identifier through its gene, transcript, CDS, protein, annotation, and analysis links.Open workspace 11Batch sequence exportRetrieve gene, mRNA, CDS, or protein FASTA sequences for a list of record identifiers.Export sequences 12Data release statusReview live record totals, GO coverage, checksums, and the current public release.Review release
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