Functional Annotation Search

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382: Hass annotations
3+: indexed evidence types

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2,418 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select PaHa02g17630	PaHa02g17630`PaHa02g17630.1`	…uclear thyroid hormone receptor binding \| ubiquitin protein ligase activity \| DNA-binding transcription factor binding Show annotation evidence eggNOG Preferred name: MED17 \| Seed ortholog: 337451.A0A443NFW0 \| COG: S \| eggNOG OG: Med17@2759\|A-1 GO GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding; GO:0003712 transcription coregulator activity; GO:0003713 transcription coactivator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006974 DNA damage response; GO:0009640 photomorphogenesis; GO:0016592 mediator complex; GO:0035196 miRNA processing; GO:0042809 nuclear vitamin... KEGG KO: K15133 \| Pathway: 04919 \| BRITE: 00001, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g17710	PaHa02g17710`PaHa02g17710.1`	…GO:0042803 \| GO:0043565 \| GO:0045892 \| GO:0046982 \| GO:0048481 \| GO:1903288 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| negative regulation of cell population proliferation \| response to abscisic acid \| fruit ripening \| fruit ripening, climacteric \| positive regulation … Show annotation evidence eggNOG Preferred name: ARF2 \| Seed ortholog: 337451.A0A443P827 \| COG: S \| eggNOG OG: AUX_IAA@131567\|A-1, AUX_IAA@2759\|AW-7, AUX_IAA@3193\|qd-19, AUX_IAA@3398\|Auy-26, Auxin_resp@131567\|A-1, Auxin_resp@2759\|N-4, Auxin_resp@3398\|CF-11, B3@131221\|yd-19, B3@131567\|A-1*, B3@3193\|AHu-20, B3@33090\|Id-12, B3@3398\|BlK-27 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008285 negative regulation of cell population proliferation; GO:0009737 response to abscisic acid; GO:0009835 fruit ripening; GO:0009836 fruit ripening, climacteric; GO:0009911 positive regulation of flower development; GO:0010047 fruit dehiscence; GO:0010150 leaf senescence; GO:0010227 floral organ abscission... KEGG KO: K14486 \| Pathway: 04075 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g17750	PaHa02g17750`PaHa02g17750.1`	…GO:0042803 \| GO:0043565 \| GO:0045892 \| GO:0046982 \| GO:0048481 \| GO:1903288 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| negative regulation of cell population proliferation \| response to abscisic acid \| fruit ripening \| fruit ripening, climacteric \| positive regulation … Show annotation evidence eggNOG Preferred name: ARF2 \| Seed ortholog: 337451.A0A443N3M7 \| COG: S \| eggNOG OG: AUX_IAA@131567\|A-1, AUX_IAA@2759\|AW-7, AUX_IAA@3193\|qd-19, AUX_IAA@3398\|Auy-26, Auxin_resp@131567\|A-1, Auxin_resp@2759\|N-4, Auxin_resp@3398\|CF-11 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008285 negative regulation of cell population proliferation; GO:0009737 response to abscisic acid; GO:0009835 fruit ripening; GO:0009836 fruit ripening, climacteric; GO:0009911 positive regulation of flower development; GO:0010047 fruit dehiscence; GO:0010150 leaf senescence; GO:0010227 floral organ abscission... KEGG KO: K14486 \| Pathway: 04075 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g17760	PaHa02g17760`PaHa02g17760.1`	…GO:0042803 \| GO:0043565 \| GO:0045892 \| GO:0046982 \| GO:0048481 \| GO:1903288 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| negative regulation of cell population proliferation \| response to abscisic acid \| fruit ripening \| fruit ripening, climacteric \| positive regulation … Show annotation evidence eggNOG Preferred name: ARF2 \| Seed ortholog: 3469.A0A4Y7JEV5 \| COG: S \| eggNOG OG: AUX_IAA@131567\|A-1, AUX_IAA@2759\|AW-7, AUX_IAA@3193\|qd-19, AUX_IAA@3398\|Auy-26, AUX_IAA@41768\|BVm-30, Auxin_resp@131567\|A-1, Auxin_resp@2759\|N-4, Auxin_resp@3398\|CF-11, Auxin_resp@41768\|IE-15, B3@131221\|yd-19, B3@131567\|A-1*, B3@3193\|AHu-20, B3@33090\|Id-12, B3@3398\|BlK-27, B3@41768\|DUD-35 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008285 negative regulation of cell population proliferation; GO:0009737 response to abscisic acid; GO:0009835 fruit ripening; GO:0009836 fruit ripening, climacteric; GO:0009911 positive regulation of flower development; GO:0010047 fruit dehiscence; GO:0010150 leaf senescence; GO:0010227 floral organ abscission... KEGG KO: K14486 \| Pathway: 04075 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g17900	PaHa02g17900`PaHa02g17900.1`	…\| 04218 \| 04814 \| 00001 \| TCR_80_115 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: TCX4 \| Seed ortholog: 337451.A0A3S4N451 \| COG: S \| eggNOG OG: TCR@131221\|Lt-19, TCR@131567\|A-1*, TCR@2759\|AQ-7! GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription KEGG KO: K21776 \| Pathway: 04218, 04814 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g17980	PaHa02g17980`PaHa02g17980.1`	… binding \| DNA-binding transcription repressor activity \| chromatin binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| nucleoplasm \| chromatin silencing complex \| chromosome \| mitochondrion \| cytosol \| chromatin organization \| chromatin remodeling \| imaginal disc morph… Show annotation evidence eggNOG Preferred name: EBP3501 \| Seed ortholog: 337451.A0A443N3R6 \| COG: S \| eggNOG OG: BAH@131567\|A-1*, BAH@2759\|BM-9 GO GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0001217 DNA-binding transcription repressor activity; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005677 chromatin silencing complex; GO:0005694 chromosome; GO:0005739 mitochondrion; GO:0005829 cytosol; GO:0006325... KEGG EC: ec:2.7.7.7 \| KO: K25868 \| BRITE: 00001, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g18540	PaHa02g18540`PaHa02g18540.1`	… \| postsynapse \| glutamatergic synapse \| sperm head-tail coupling apparatus \| DNA-binding transcription factor binding \| protein aggregate center \| cytoplasm protein quality control \| positive regulation of protein folding \| axonemal central apparatus assembly Show annotation evidence eggNOG Preferred name: LOC107765796 \| Seed ortholog: 337451.A0A443NGJ6 \| COG: S \| eggNOG OG: DnaJ@131567\|Cwn-23, DnaJ@2759\|MXw-33, DnaJ@3398\|dxd-44, DnaJ@35493\|YnC-41, DnaJ_C@131567\|B-2, DnaJ_C@3398\|AEU-21, DnaJ_C@35493\|ej-18 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001534 radial spoke; GO:0001671 ATPase activator activity; GO:0002088 lens development in camera-type eye; GO:0002236 detection of misfolded protein; GO:0003341 cilium movement; GO:0003351 epithelial cilium movement involved in extracellular fluid movement; GO:0003714 transcription corepressor activity; GO:0005515 protein binding; GO:0005575... KEGG KO: K09510 \| Pathway: 04141, 05164 \| BRITE: 00001, 03110	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g19070	PaHa02g19070`PaHa02g19070.1`	PaHa02g19070 \| PaHa02g19070.1 \| LOC110796424 \| 218851.A0A2G5E0X1 \| CH@131567\|A-1* \| CH@1437183\|AjM-22 \| CH@2759\|HS-11 \| CH@33090\|ACH-19 \| Kinesin@131567\|A-1* \| Kinesin@2759\|Bid-19 \| Kinesin@3193\|Jja-32 \| Kinesin@3398\|MEU-35 \| S \| K10406 \| 04814 \| 00001 \|... Show annotation evidence eggNOG Preferred name: LOC110796424 \| Seed ortholog: 218851.A0A2G5E0X1 \| COG: S \| eggNOG OG: CH@131567\|A-1, CH@1437183\|AjM-22, CH@2759\|HS-11, CH@33090\|ACH-19, Kinesin@131567\|A-1, Kinesin@2759\|Bid-19, Kinesin@3193\|Jja-32, Kinesin@3398\|MEU-35 GO GO:0001525 angiogenesis; GO:0001568 blood vessel development; GO:0001935 endothelial cell proliferation; GO:0002244 hematopoietic progenitor cell differentiation; GO:0003774 cytoskeletal motor activity; GO:0003777 microtubule motor activity; GO:0005085 guanyl-nucleotide exchange factor activity; GO:0005096 GTPase activator activity; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005547... KEGG KO: K10406 \| Pathway: 04814 \| BRITE: 00001, 04812	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g19440	PaHa02g19440`PaHa02g19440.1`	…tor binding \| protein binding \| nucleus \| ubiquitin-dependent protein catabolic process \| transcription factor binding \| proteasome regulatory particle, base subcomplex \| plastid \| ATP hydrolysis activity \| TBP-class protein binding \| protein domain specific binding \| thyrotropin-releasing hormone r… Show annotation evidence eggNOG Preferred name: RPT6A \| Seed ortholog: 337451.A0A3S3N426 \| COG: S \| eggNOG OG: AAA@131567\|Afu-19, AAA@2759\|NSS-33, AAA_lid_3@131567\|DL-10, AAA_lid_3@2759\|Xo-16, AAA_lid_3@3398\|PoJ-42, Prot_ATP_ID_OB@131567\|A-1, Prot_ATP_ID_OB@2759\|Ae-8 GO GO:0000502 proteasome complex; GO:0003712 transcription coregulator activity; GO:0005102 signaling receptor binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006511 ubiquitin-dependent protein catabolic process; GO:0008134 transcription factor binding; GO:0008540 proteasome regulatory particle, base subcomplex; GO:0009536 plastid; GO:0016887 ATP hydrolysis activity; GO:0017025 TBP-class protein binding;... KEGG KO: K03066 \| Pathway: 03050 \| BRITE: 00001, 03051	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g19450	PaHa02g19450`PaHa02g19450.1`	…tor binding \| protein binding \| nucleus \| ubiquitin-dependent protein catabolic process \| transcription factor binding \| proteasome regulatory particle, base subcomplex \| plastid \| ATP hydrolysis activity \| TBP-class protein binding \| protein domain specific binding \| thyrotropin-releasing hormone r… Show annotation evidence eggNOG Preferred name: RPT6A \| Seed ortholog: 337451.A0A3S3MGD4 \| COG: S \| eggNOG OG: AAA@131567\|Afu-19, AAA@2759\|NSS-33, AAA_lid_3@131567\|DL-10, AAA_lid_3@2759\|Xo-16, AAA_lid_3@3398\|PoJ-42, Prot_ATP_ID_OB@131567\|A-1, Prot_ATP_ID_OB@2759\|Ae-8 GO GO:0000502 proteasome complex; GO:0003712 transcription coregulator activity; GO:0005102 signaling receptor binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006511 ubiquitin-dependent protein catabolic process; GO:0008134 transcription factor binding; GO:0008540 proteasome regulatory particle, base subcomplex; GO:0009536 plastid; GO:0016887 ATP hydrolysis activity; GO:0017025 TBP-class protein binding;... KEGG KO: K03066 \| Pathway: 03050 \| BRITE: 00001, 03051	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g19460	PaHa02g19460`PaHa02g19460.1`	…tor binding \| protein binding \| nucleus \| ubiquitin-dependent protein catabolic process \| transcription factor binding \| proteasome regulatory particle, base subcomplex \| plastid \| ATP hydrolysis activity \| TBP-class protein binding \| protein domain specific binding \| thyrotropin-releasing hormone r… Show annotation evidence eggNOG Preferred name: OsRpt6 \| Seed ortholog: 42345.A0A2H3XL10 \| COG: S \| eggNOG OG: AAA@131567\|Afu-19, AAA@2759\|NSS-33, AAA_lid_3@131567\|DL-10, AAA_lid_3@2759\|Xo-16, AAA_lid_3@3398\|PoJ-42, Prot_ATP_ID_OB@131567\|A-1, Prot_ATP_ID_OB@2759\|Ae-8 GO GO:0000502 proteasome complex; GO:0003712 transcription coregulator activity; GO:0005102 signaling receptor binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006511 ubiquitin-dependent protein catabolic process; GO:0008134 transcription factor binding; GO:0008540 proteasome regulatory particle, base subcomplex; GO:0009536 plastid; GO:0016887 ATP hydrolysis activity; GO:0017025 TBP-class protein binding;... KEGG KO: K03066 \| Pathway: 03050 \| BRITE: 00001, 03051	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g19470	PaHa02g19470`PaHa02g19470.1`	…tory region sequence-specific DNA binding \| DNA binding \| chromatin binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| pollen development \| anther development \| anther morphogenesis \| anther wall tapetum cell differentiation … Show annotation evidence eggNOG Preferred name: AMS \| Seed ortholog: 337451.A0A3S3P3A8 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|FXN-30, HLH@33090\|AAF-17, HLH@35493\|Aps-20, bHLH-MYC_N@131567\|A-1*, bHLH-MYC_N@2759\|C-2, bHLH-MYC_N@3193\|Ad-9, bHLH-MYC_N@33090\|s-7 GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0048653 anther development; GO:0048654 anther morphogenesis; GO:0048657 anther wall tapetum...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g19480	PaHa02g19480`PaHa02g19480.1`	…tory region sequence-specific DNA binding \| DNA binding \| chromatin binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| pollen development \| anther development \| anther morphogenesis \| anther wall tapetum cell differentiation … Show annotation evidence eggNOG Preferred name: AMS \| Seed ortholog: 337451.A0A3S3P3A8 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|FXN-30, HLH@33090\|AAF-17, HLH@35493\|Aps-20, bHLH-MYC_N@131567\|A-1*, bHLH-MYC_N@2759\|C-2, bHLH-MYC_N@3193\|Ad-9, bHLH-MYC_N@33090\|s-7 GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0048653 anther development; GO:0048654 anther morphogenesis; GO:0048657 anther wall tapetum...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g20140	PaHa02g20140`PaHa02g20140.1`	…n cis-regulatory region binding \| DNA binding \| double-stranded DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to cold \| photomorphogenesis \| response to abscisic acid \| gibberellic acid mediated signaling pa… Show annotation evidence eggNOG Preferred name: ABCC3 \| Seed ortholog: 337451.A0A443P637 \| COG: S \| eggNOG OG: bZIP_1@131221\|COW-31, bZIP_1@131567\|XL-17, bZIP_1@2759\|is-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003690 double-stranded DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009640 photomorphogenesis; GO:0009737 response to abscisic acid; GO:0009740 gibberellic acid mediated... KEGG KO: K16241 \| Pathway: 04712 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g20390	PaHa02g20390`PaHa02g20390.1`	…O:0005515 \| GO:0005634 \| GO:0005737 \| GO:0008284 \| GO:0009733 \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| positive regulation of cell population proliferation \| response to auxin Show annotation evidence eggNOG Preferred name: LOC107892314 \| Seed ortholog: 210143.A0A1R3JPA3 \| COG: S \| eggNOG OG: E2F_TDP@131567\|s-6, E2F_TDP@1437201\|Ph-22 GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008284 positive regulation of cell population proliferation; GO:0009733 response to auxin KEGG KO: K09391 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g21430	PaHa02g21430`PaHa02g21430.1`	… protein catabolic process \| negative regulation of inclusion body assembly \| DNA-binding transcription factor binding \| cytoplasm protein quality control \| positive regulation of protein folding \| axonemal central apparatus assembly Show annotation evidence eggNOG Preferred name: LOC103720927 \| Seed ortholog: 52838.A0A4S8JBI3 \| COG: S \| eggNOG OG: DnaJ@131567\|Cwn-23, DnaJ@1437197\|mfh-49, DnaJ@2759\|MXw-33, DnaJ@3398\|dxe-44, DnaJ@35493\|YnC-41, DnaJ_C@131567\|B-2, DnaJ_C@1437183\|AbY-23, DnaJ_C@1437197\|Aps-24, DnaJ_C@3398\|AET-21, DnaJ_C@35493\|ej-18 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001671 ATPase activator activity; GO:0002088 lens development in camera-type eye; GO:0002236 detection of misfolded protein; GO:0003341 cilium movement; GO:0003351 epithelial cilium movement involved in extracellular fluid movement; GO:0003714 transcription corepressor activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0006413... KEGG KO: K09510 \| Pathway: 04141, 05164 \| BRITE: 00001, 03110	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g21800	PaHa02g21800`PaHa02g21800.1`	…tory region sequence-specific DNA binding \| DNA binding \| chromatin binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| pollen development \| anther development \| anther morphogenesis \| anther wall tapetum cell differentiation … Show annotation evidence eggNOG Preferred name: AMS \| Seed ortholog: 337451.A0A3S3P3A8 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|FXN-30, HLH@33090\|AAF-17, HLH@35493\|Aps-20, bHLH-MYC_N@131567\|A-1*, bHLH-MYC_N@2759\|C-2, bHLH-MYC_N@3193\|Ad-9, bHLH-MYC_N@33090\|s-7 GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0048653 anther development; GO:0048654 anther morphogenesis; GO:0048657 anther wall tapetum...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g21840	PaHa02g21840`PaHa02g21840.1`	…GO:0005634 \| GO:0006355 \| GO:0009266 \| GO:0009740 \| GO:0034244 \| GO:0048579 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to temperature stimulus \| gibberellic acid mediated signaling pathway \| negative regulation of tr… Show annotation evidence eggNOG Preferred name: LOC110804844 \| Seed ortholog: 337451.A0A443Q454 \| COG: S \| eggNOG OG: Myb_DNA-binding@33090\|B-2!, Myb_DNA-binding@35493\|AH-8 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009266 response to temperature stimulus; GO:0009740 gibberellic acid mediated signaling pathway; GO:0034244 negative regulation of transcription elongation by RNA polymerase II; GO:0048579 negative regulation of long-day photoperiodism, flowering	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g22400	PaHa02g22400`PaHa02g22400.1`	…ing \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity, RNA polymerase II-specific \| cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription repressor activity, RNA polymerase II-specific \| DNA-binding transcrip… Show annotation evidence eggNOG Preferred name: AGL14 \| Seed ortholog: 337451.A0A443PAR6 \| COG: S \| eggNOG OG: SRF-TF@131567\|A-1*, SRF-TF@2759\|C-2! GO GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0000900 mRNA regulatory element binding translation repressor activity; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase... KEGG KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000, 03021, 04131	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g22490	PaHa02g22490`PaHa02g22490.1`	…ind_15_104 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0006970 \| GO:0009737 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to osmotic stress \| response to abscisic acid Show annotation evidence eggNOG Preferred name: HSFC1 \| Seed ortholog: 337451.A0A3S3LXP1 \| COG: S \| eggNOG OG: HSF_DNA-bind@131567\|Dp-10, HSF_DNA-bind@1437183\|AMo-22, HSF_DNA-bind@33090\|mg-19 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006970 response to osmotic stress; GO:0009737 response to abscisic acid KEGG KO: K09419 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g22520	PaHa02g22520`PaHa02g22520.1`	PaHa02g22520 \| PaHa02g22520.1 \| LOC104592205 \| 337451.A0A443N4D3 \| FKBP_C@131567\|Oe-14 \| FKBP_C@2759\|AAG-21! \| FKBP_C@3398\|HOQ-32 \| S \| ec:5.2.1.8 \| K09571 \| 00100 \| 01100 \| 01110 \| 03015 \| 04915 \| M00101 \| M00917 \| 00001 \| 01000 \| 03110 \| FKBP_C_167_231 \|... Show annotation evidence eggNOG Preferred name: LOC104592205 \| Seed ortholog: 337451.A0A443N4D3 \| COG: S \| eggNOG OG: FKBP_C@131567\|Oe-14, FKBP_C@2759\|AAG-21!, FKBP_C@3398\|HOQ-32 GO GO:0000747 conjugation with cellular fusion; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0003755 peptidyl-prolyl cis-trans isomerase activity; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005525 GTP binding; GO:0005527 macrolide binding; GO:0005528 FK506 binding; GO:0005575 cellular_component; GO:0005576... KEGG EC: ec:5.2.1.8 \| KO: K09571 \| Pathway: 00100, 01100, 01110, 03015, 04915 \| Module: M00101, M00917 \| BRITE: 00001, 01000, 03110	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g22530	PaHa02g22530`PaHa02g22530.1`	PaHa02g22530 \| PaHa02g22530.1 \| RPL37A \| 337451.A0A443NFV3 \| Ribosomal_L37e@131567\|A-1 \| Ribosomal_L37e@58023\|OJ-19 \| S \| K02922 \| 03010 \| 00001 \| 01610 \| 03011 \| Ribosomal_L37e_3_53 \| GO:0000448 \| GO:0002181 \| GO:0003723 \| GO:0003735 \| GO:0005634 \| GO... Show annotation evidence eggNOG Preferred name: RPL37A \| Seed ortholog: 337451.A0A443NFV3 \| COG: S \| eggNOG OG: Ribosomal_L37e@131567\|A-1, Ribosomal_L37e@58023\|OJ-19 GO GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0002181 cytoplasmic translation; GO:0003723 RNA binding; GO:0003735 structural constituent of ribosome; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005840 ribosome; GO:0006412 translation; GO:0006941 striated muscle contraction; GO:0007283... KEGG KO: K02922 \| Pathway: 03010 \| BRITE: 00001, 01610, 03011	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g22710	PaHa02g22710`PaHa02g22710.1`	…DNA binding \| RNA polymerase II core promoter sequence-specific DNA binding \| TFIID-class transcription factor complex binding \| epithelial cilium movement involved in extracellular fluid movement \| DNA helicase activity \| transcription corepressor activity \| protein binding \| ATP binding \| cellular… Show annotation evidence eggNOG Preferred name: LOC103718956 \| Seed ortholog: 337451.A0A443N4G3 \| COG: COG1224 \| eggNOG OG: TIP49@131567\|C-2, TIP49_C@131567\|C-2 GO GO:0000123 histone acetyltransferase complex; GO:0000492 box C/D snoRNP assembly; GO:0000723 telomere maintenance; GO:0000785 chromatin; GO:0000786 nucleosome; GO:0000791 euchromatin; GO:0000812 Swr1 complex; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding; GO:0001094 TFIID-class transcription factor complex... KEGG EC: ec:5.6.2.3 \| KO: K11338 \| Pathway: 03082 \| BRITE: 00001, 01000, 03036, 03037	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g22960	PaHa02g22960`PaHa02g22960.1`	…062 \| GO:0043565 \| GO:0090628 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| negative regulation of trichoblast fate specification \| sequence-specific DNA binding \| plant epidermal cell fate specification Show annotation evidence eggNOG Preferred name: LOC103706858 \| Seed ortholog: 337451.A0A3S3NQX4 \| COG: S \| eggNOG OG: Homeodomain@131567\|Fe-12, Homeodomain@35493\|DQI-27, START@131567\|e-5, START@2759\|CM-9!, START@35493\|tQ-19 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010062 negative regulation of trichoblast fate specification; GO:0043565 sequence-specific DNA binding; GO:0090628 plant epidermal cell fate specification KEGG KO: K09338 \| Pathway: 04814 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g23020	PaHa02g23020`PaHa02g23020.1`	…R_104_138 \| TCR_189_223 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: TCX5 \| Seed ortholog: 337451.A0A443N4J4 \| COG: S \| eggNOG OG: TCR@131567\|A-1*, TCR@2759\|AP-7, TCR@3193\|FG-14, TCR@3398\|Fx-15 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription KEGG KO: K21776 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g23350	PaHa02g23350`PaHa02g23350.1`	…GO:0009867 \| GO:0042803 \| GO:0048831 \| GO:0055062 \| GO:0080040 \| GO:0140297 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| jasmonic acid mediated signaling pathway \| protein homodimerization activity \| regulation of s… Show annotation evidence eggNOG Preferred name: LOC104592120 \| Seed ortholog: 337451.A0A3S3MGS9 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|DyJ-28, HLH@33090\|AAF-17, HLH@35493\|Aps-20 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009867 jasmonic acid mediated signaling pathway; GO:0042803 protein homodimerization activity; GO:0048831 regulation of shoot system development; GO:0055062 phosphate ion homeostasis; GO:0080040 positive regulation of cellular response...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g23410	PaHa02g23410`PaHa02g23410.1`	…gation by RNA polymerase II \| snRNA modification \| RNA polymerase II-specific DNA-binding transcription factor binding \| 7SK snRNA binding \| snRNA methylation \| positive regulation of G1/S transition of mitotic cell cycle \| positive regulation of protein localization to Cajal body \| positive regulat… Show annotation evidence eggNOG Preferred name: LOC123168397 \| Seed ortholog: 42345.A0A3Q0I3J2 \| COG: S \| eggNOG OG: Bin3@131567\|A-1*, Bin3@2759\|C-2 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000723 telomere maintenance; GO:0001510 RNA methylation; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0008168 methyltransferase activity; GO:0008173 RNA methyltransferase activity; GO:0008757 S-adenosylmethionine-dependent methyltransferase activity; GO:0016073 snRNA metabolic process; GO:0016180 snRNA... KEGG KO: K15190 \| BRITE: 00001, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g23630	PaHa02g23630`PaHa02g23630.1`	…825 \| GO:0043565 \| GO:0045893 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| multidimensional cell growth \| sequence-specific DNA binding \| positive regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: DREB3 \| Seed ortholog: 337451.A0A443N1W5 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@1437183\|DKM-29, AP2@33090\|KR-15, AP2@3398\|BZy-26, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009825 multidimensional cell growth; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g23760	PaHa02g23760`PaHa02g23760.1`	…263 \| GO:0080060 \| GO:1905392 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| positive regulation of cell population proliferation \| response to auxin \| determination of bilateral symmetry \| leaf morphogenesis \| meristem initiation \| procambium h… Show annotation evidence eggNOG Preferred name: ATHB-15 \| Seed ortholog: 337451.A0A443N1T9 \| COG: S \| eggNOG OG: Homeodomain@131567\|HP-13, Homeodomain@35493\|CNx-26, MEKHLA@131567\|A-1, MEKHLA@35493\|c-6, START@131567\|e-5, START@1437183\|dS-17, START@2759\|CL-9, START@35493\|JJ-13 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0008284 positive regulation of cell population proliferation; GO:0009733 response to auxin; GO:0009855 determination of bilateral symmetry; GO:0009965 leaf morphogenesis; GO:0010014 meristem initiation; GO:0010067 procambium histogenesis; GO:0010072 primary shoot apical meristem... KEGG KO: K09338 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g23800	PaHa02g23800`PaHa02g23800.1`	…GO:0005634 \| GO:0010197 \| GO:0010228 \| GO:0035101 \| karyogamy \| euchromatin \| DNA-binding transcription factor activity \| protein binding \| nucleus \| polar nucleus fusion \| vegetative to reproductive phase transition of meristem \| FACT complex Show annotation evidence eggNOG Preferred name: SSRP1 \| Seed ortholog: 337451.A0A3S3MBS1 \| COG: S \| eggNOG OG: HMG_box@131567\|Aj-7, HMG_box@2759\|Og-14, POB3_N@131567\|A-1, Rtt106@131567\|A-1*, Rtt106@2759\|b-5, SSrecog@2759\|A-1 GO GO:0000741 karyogamy; GO:0000791 euchromatin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010197 polar nucleus fusion; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0035101 FACT complex KEGG EC: ec:2.1.1.354 \| KO: K09272 \| Pathway: 00310, 01100 \| BRITE: 00001, 03000, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,418 genes for “transcription factor”

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