Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382
Hass annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

Matches

2,418 genes for “transcription factor”

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GO enrichmentExport FASTA
SelectGeneMatched annotationEvidenceActions
PaHa03g17290PaHa03g17290.1

…GO:0005515 | GO:0005634 | GO:0009554 | GO:0009908 | GO:0030163 | GO:0046622 | DNA-binding transcription factor activity | protein binding | nucleus | megasporogenesis | flower development | protein catabolic process | positive regulation of organ growth

Show annotation evidence
eggNOG
Preferred name: SAP | Seed ortholog: 337451.A0A3S3NW50 | COG: S | eggNOG OG: UNK.92RE@58023|A-1
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009554 megasporogenesis; GO:0009908 flower development; GO:0030163 protein catabolic process; GO:0046622 positive regulation of organ growth
eggNOGGO
eggNOG-inferred
PaHa03g17410PaHa03g17410.1

…18 | GO:0010218 | GO:0042753 | GO:0045893 | GO:1900056 | molecular_function | DNA-binding transcription factor activity | protein binding | cellular_component | nucleus | biological_process | plasmodesma | response to red or far red light | red or far-red light signaling pathway | far-red light sign…

Show annotation evidence
eggNOG
Preferred name: ZSWIM3 | Seed ortholog: 337451.A0A443NCY9 | COG: COG4715 | eggNOG OG: SWIM@131567|Z-5
GO
GO:0003674 molecular_function; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0008150 biological_process; GO:0009506 plasmodesma; GO:0009639 response to red or far red light; GO:0010017 red or far-red light signaling pathway; GO:0010018 far-red light signaling pathway; GO:0010218 response to far red light; GO:0042753 positive...
KEGG
EC: ec:3.4.16.5 | KO: K13289, K17604, K26145 | Pathway: 04142 | BRITE: 00001, 01000, 01002, 01009, 03110, 04131, 04147, 04990
eggNOGGOKEGG
eggNOG-inferred
PaHa03g17430PaHa03g17430.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

Show annotation evidence
eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A3S3MAU8 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
PaHa03g17440PaHa03g17440.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

Show annotation evidence
eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A3S3MAU8 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
PaHa03g17460PaHa03g17460.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

Show annotation evidence
eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A3S3MAW9 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
PaHa03g17850PaHa03g17850.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

Show annotation evidence
eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A3S3MAU8 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
PaHa03g17880PaHa03g17880.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

Show annotation evidence
eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A443NCY5 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
PaHa03g17940PaHa03g17940.1

…484 | GO:0120195 | GO:1902074 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to fungus | response to abscisic acid | programmed cell death | regulation of RNA splicing | posi…

Show annotation evidence
eggNOG
Preferred name: MYB108 | Seed ortholog: 337451.A0A3S3MWX4 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3398|KPD-43, Myb_DNA-binding@35493|EcV-37
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009620 response to fungus; GO:0009737 response to abscisic acid; GO:0012501 programmed cell death; GO:0043484 regulation of RNA splicing; GO:0120195 positive regulation of anther dehiscence; GO:1902074...
KEGG
EC: ec:1.17.99.9 | KO: K09422 | Pathway: 00190, 00860, 01100, 01110, 01240, 04626 | Module: M00154 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa03g18210PaHa03g18210.1

…:0040008 | transcription cis-regulatory region binding | molecular_function | DNA-binding transcription factor activity | protein binding | cellular_component | chloroplast | brassinosteroid mediated signaling pathway | regulation of growth

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eggNOG
Preferred name: LOC116199953 | Seed ortholog: 337451.A0A3S3NW94 | COG: S | eggNOG OG: UNK.LG8Z@131567|A-1*, UNK.LG8Z@3398|C-2!
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003674 molecular_function; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0009507 chloroplast; GO:0009742 brassinosteroid mediated signaling pathway; GO:0040008 regulation of growth
eggNOGGO
eggNOG-inferred
PaHa03g18220PaHa03g18220.1

…742 | GO:0042542 | GO:0043565 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to oxidative stress | response to salt stress | brassinosteroid mediated signaling pathway | resp…

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eggNOG
Preferred name: BHLH148 | Seed ortholog: 337451.A0A443ND14 | COG: S | eggNOG OG: UNK.FBJB@131567|A-1*, UNK.FBJB@3398|d-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006979 response to oxidative stress; GO:0009651 response to salt stress; GO:0009742 brassinosteroid mediated signaling pathway; GO:0042542 response to hydrogen peroxide; GO:0043565 sequence-specific...
eggNOGGO
eggNOG-inferred
PaHa03g18660PaHa03g18660.1

…GO:0006971 | GO:0009267 | GO:0043565 | GO:0045893 | GO:0046982 | GO:2000693 | DNA-binding transcription factor activity | protein binding | nucleus | hypotonic response | cellular response to starvation | sequence-specific DNA binding | positive regulation of DNA-templated transcription | protein he…

Show annotation evidence
eggNOG
Preferred name: OBF1 | Seed ortholog: 337451.A0A3S4NFA4 | COG: S | eggNOG OG: bZIP_1@131567|iz-20, bZIP_1@33090|Buj-30, bZIP_1@3398|CPH-31
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006971 hypotonic response; GO:0009267 cellular response to starvation; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0046982 protein heterodimerization activity; GO:2000693 positive regulation of seed maturation
KEGG
KO: K25786 | Pathway: 04022, 04024, 04148, 04151, 04152, 04211, 04261, 04380, 04612, 04668, 04710, 04713, 04714, 04725, 04728, 04911, 04915, 04916, 04918, 04922, 04924, 04925, 04926, 04927, 04928, 04931, 04934, 04935, 04962, 05016, 05020, 05030, 05031, 05034, 05152, 05161, 05163, 05165, 05166, 05167, 05202, 05203, 05207, 05215 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa03g18760PaHa03g18760.1

…555 | GO:1900386 | GO:1990841 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | negative regulation of cell population proliferation | response to light stimulus | response to salt stress | response to ethylene | response to auxin…

Show annotation evidence
eggNOG
Preferred name: MYB12 | Seed ortholog: 337451.A0A443ND81 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|DqE-36, Myb_DNA-binding@35493|FSr-38, Myb_DNA-binding@58023|HJu-40!
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008285 negative regulation of cell population proliferation; GO:0009416 response to light stimulus; GO:0009651 response to salt stress; GO:0009723 response to ethylene; GO:0009733 response to auxin; GO:0009813 flavonoid biosynthetic process; GO:0010224...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa03g18860PaHa03g18860.1

…y response regulator activity | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | cytosol | response to water deprivation | chloroplast | response to ethylene | response to cytokinin | cytokinin-activated signaling pathw…

Show annotation evidence
eggNOG
Preferred name: LOC120105689 | Seed ortholog: 337451.A0A3S4NFB8 | COG: S | eggNOG OG: Myb_DNA-binding@131567|Se-18, Myb_DNA-binding@1437183|DKy-35, Myb_DNA-binding@33090|Bhq-32, Response_reg|AT38GL@131567, Response_reg|AT38GL@2759, Response_reg|AT38GL@33090, Response_reg|AT38GL@3398
GO
GO:0000156 phosphorelay response regulator activity; GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0009414 response to water deprivation; GO:0009507 chloroplast; GO:0009723 response to ethylene; GO:0009735 response to cytokinin; GO:0009736 cytokinin-activated...
KEGG
KO: K14491 | Pathway: 04075 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa03g19680PaHa03g19680.1

…ing | RNA polymerase II cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity, RNA polymerase II-specific | DNA-binding transcription repressor activity | DNA-binding transcription activator activity, RNA polymerase II-specific | DNA binding | chromatin bind…

Show annotation evidence
eggNOG
Preferred name: LOC104599016 | Seed ortholog: 337451.A0A3S3MMU1 | COG: COG2036 | eggNOG OG: CBFD_NFYB_HMF@131567|BS-10, CBFD_NFYB_HMF@2759|GM-15, CBFD_NFYB_HMF@3398|BqF-32
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001217 DNA-binding transcription repressor activity; GO:0001228 DNA-binding transcription activator...
KEGG
EC: ec:6.5.1.3 | KO: K08065 | Pathway: 04612, 05152, 05166 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa03g20140PaHa03g20140.1

…11 | NAM@35493|Z-5 | S | NAM_103_244 | GO:0003700 | GO:0005515 | GO:0005634 | DNA-binding transcription factor activity | protein binding | nucleus

Show annotation evidence
eggNOG
Preferred name: NAC008 | Seed ortholog: 337451.A0A3S4N9H1 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|HY-10, NAM@3398|LW-11, NAM@35493|Z-5
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus
eggNOGGO
eggNOG-inferred
PaHa03g20850PaHa03g20850.1

PaHa03g20850 | PaHa03g20850.1 | LOC110796628 | 337451.A0A443N5V4 | Ank_2@131567|BN-7 | Ank_2@2759|hc-12 | PGG@131567|A-1* | PGG@3193|DB-9 | PGG@33090|a-5 | PGG@3398|kI-19 | S | K04971 | K04972 | K04973 | K04974 | K04975 | K04984 | K05222 | K15503 | 04080 |...

Show annotation evidence
eggNOG
Preferred name: LOC110796628 | Seed ortholog: 337451.A0A443N5V4 | COG: S | eggNOG OG: Ank_2@131567|BN-7, Ank_2@2759|hc-12, PGG@131567|A-1*, PGG@3193|DB-9, PGG@33090|a-5, PGG@3398|kI-19
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001659 temperature homeostasis; GO:0001660 fever generation; GO:0001774 microglial cell activation; GO:0001964 startle response; GO:0002024 diet induced thermogenesis; GO:0002790 peptide secretion; GO:0003085 negative regulation of systemic arterial blood pressure; GO:0003674 molecular_function; GO:0004888 transmembrane signaling receptor...
KEGG
KO: K04971, K04972, K04973, K04974, K04975, K04984, K05222, K15503 | Pathway: 04080, 04218, 04621, 04750, 04928, 04961, 04970, 04978, 05418 | BRITE: 00001, 01009, 03400, 04040
eggNOGGOKEGG
eggNOG-inferred
PaHa03g21370PaHa03g21370.1

…634 | GO:0010374 | GO:0090627 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | stomatal complex development | plant epidermal cell differentiation

Show annotation evidence
eggNOG
Preferred name: MUTE | Seed ortholog: 337451.A0A3S3MXB2 | eggNOG OG: HLH@131567|OW-12, HLH@3193|pN-16, HLH@3398|AAL-17, HLH@35493|gX-15
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010374 stomatal complex development; GO:0090627 plant epidermal cell differentiation
KEGG
KO: K09092, K22495 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa03g21770PaHa03g21770.1

…893 | GO:0048316 | GO:2000029 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | jasmonic acid mediated signaling pathway | regulation of flavonoid biosynthetic process | trichome differentiation | seed coat development | positive …

Show annotation evidence
eggNOG
Preferred name: BHLH | Seed ortholog: 337451.A0A3S3NWQ0 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|GTL-31!, HLH@33090|AAF-17, HLH@35493|Aps-20, bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|C-2, bHLH-MYC_N@3193|Ac-9, bHLH-MYC_N@33090|r-7
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009867 jasmonic acid mediated signaling pathway; GO:0009962 regulation of flavonoid biosynthetic process; GO:0010026 trichome differentiation; GO:0010214 seed coat development; GO:0031542 positive regulation of anthocyanin biosynthetic process; GO:0045893...
eggNOGGO
eggNOG-inferred
PaHa03g22030PaHa03g22030.1

PaHa03g22030 | PaHa03g22030.1 | LOC103719229 | 337451.A0A3S3Q141 | Sigma70_r2@131567|AQM-18! | Sigma70_r2@3398|LAa-28 | Sigma70_r3@131567|C-2! | Sigma70_r3@58023|DC-9 | Sigma70_r4@131567|Bnn-30 | COG0568 | Sigma70_r2_215_281 | Sigma70_r3_295_367 | Sigma70...

Show annotation evidence
eggNOG
Preferred name: LOC103719229 | Seed ortholog: 337451.A0A3S3Q141 | COG: COG0568 | eggNOG OG: Sigma70_r2@131567|AQM-18!, Sigma70_r2@3398|LAa-28, Sigma70_r3@131567|C-2!, Sigma70_r3@58023|DC-9, Sigma70_r4@131567|Bnn-30
GO
GO:0006352 DNA-templated transcription initiation; GO:0009507 chloroplast; GO:0016987 sigma factor activity; GO:0071482 cellular response to light stimulus; GO:2001141 regulation of RNA biosynthetic process
eggNOGGO
eggNOG-inferred
PaHa03g22360PaHa03g22360.1

PaHa03g22360 | PaHa03g22360.1 | APUM2 | 337451.A0A3S3MN59 | NABP@131567|A-1* | NABP@2759|C-2 | NABP@3398|M-4 | PUF@131567|Dq-15 | PUF@2759|FE-16 | PUF@3398|Apn-35 | PUF@35493|nu-27 | S | ec:3.6.5.5 | K17943 | 04144 | 05017 | 00001 | NABP_273_693 | PUF_698...

Show annotation evidence
eggNOG
Preferred name: APUM2 | Seed ortholog: 337451.A0A3S3MN59 | COG: S | eggNOG OG: NABP@131567|A-1*, NABP@2759|C-2, NABP@3398|M-4, PUF@131567|Dq-15, PUF@2759|FE-16, PUF@3398|Apn-35, PUF@35493|nu-27
GO
GO:0000278 mitotic cell cycle; GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening; GO:0000956 nuclear-transcribed mRNA catabolic process; GO:0001501 skeletal system development; GO:0001942 hair follicle development; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0003730 mRNA 3'-UTR binding; GO:0005737 cytoplasm; GO...
KEGG
EC: ec:3.6.5.5 | KO: K17943 | Pathway: 04144, 05017 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa03g22520PaHa03g22520.1

…515 | GO:0005634 | GO:0006355 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: SCL9 | Seed ortholog: 337451.A0A443NE08 | COG: S | eggNOG OG: GRAS@131567|Ae-10, GRAS@3398|AAu-22
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
KEGG
KO: K27753 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa03g22970PaHa03g22970.1

…176 | GO:1901002 | GO:1902584 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | DNA damage response | negative regulation of cell population proliferation | response to cold | response to ethylene | response to auxin | response to…

Show annotation evidence
eggNOG
Preferred name: MYB3R3 | Seed ortholog: 337451.A0A3S3MN87 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AWj-28, Myb_DNA-binding@2759|AhA-29
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006974 DNA damage response; GO:0008285 negative regulation of cell population proliferation; GO:0009409 response to cold; GO:0009723 response to ethylene; GO:0009733 response to auxin; GO:0009751 response to salicylic acid; GO:0009753 response to jasmonic...
KEGG
KO: K09422 | Pathway: 04151, 04218 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa03g23150PaHa03g23150.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3MBI9 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|KFz-41!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|ai-13
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K14497, K16225, K16226 | Pathway: 04016, 04075, 04626 | BRITE: 00001, 01000
eggNOGGOKEGG
eggNOG-inferred
PaHa03g23170PaHa03g23170.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3MBI9 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|KFz-41!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|ai-13
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K14497, K16225, K16226 | Pathway: 04016, 04075, 04626 | BRITE: 00001, 01000
eggNOGGOKEGG
eggNOG-inferred
PaHa03g23180PaHa03g23180.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3MBI9 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|KFz-41!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|ai-13
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K14497, K16225, K16226 | Pathway: 04016, 04075, 04626 | BRITE: 00001, 01000
eggNOGGOKEGG
eggNOG-inferred
PaHa03g23190PaHa03g23190.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3MBI9 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|KFz-41!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|ai-13
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K14497, K16225, K16226 | Pathway: 04016, 04075, 04626 | BRITE: 00001, 01000
eggNOGGOKEGG
eggNOG-inferred
PaHa03g23580PaHa03g23580.1

PaHa03g23580 | PaHa03g23580.1 | LOC103719222 | 337451.A0A443NMQ5 | PCI@131567|LE-15 | eIF3_N@2759|A-1 | S | ec:2.6.1.62 | ec:6.3.3.3 | K03250 | 03010 | M00123 | 00001 | 03012 | 03051 | 04147 | PCI_285_399 | eIF3_N_5_137 | GO:0003729 | GO:0005515 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC103719222 | Seed ortholog: 337451.A0A443NMQ5 | COG: S | eggNOG OG: PCI@131567|LE-15, eIF3_N@2759|A-1
GO
GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005852 eukaryotic translation initiation factor 3 complex; GO:0006352 DNA-templated transcription initiation; GO:0006412 translation; GO:0008180 COP9 signalosome; GO:0009640 photomorphogenesis; GO:0009908 flower development; GO:0030371 translation repressor activity; GO:0031597 cytosolic...
KEGG
EC: ec:2.6.1.62, ec:6.3.3.3 | KO: K03250 | Pathway: 03010 | Module: M00123 | BRITE: 00001, 03012, 03051, 04147
eggNOGGOKEGG
eggNOG-inferred
PaHa03g23790PaHa03g23790.1

…GO:0008284 | GO:0009880 | GO:0009942 | GO:0010654 | GO:0048825 | GO:0090451 | DNA-binding transcription factor activity | nucleus | positive regulation of cell population proliferation | embryonic pattern specification | longitudinal axis specification | apical cell fate commitment | cotyledon devel…

Show annotation evidence
eggNOG
Preferred name: WOX2 | Seed ortholog: 337451.A0A3S3NC77 | COG: S | eggNOG OG: Homeodomain@131567|RH-16, Homeodomain@2759|XV-17!, Homeodomain@33090|BEn-23, Homeodomain@3398|ByA-25
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0008284 positive regulation of cell population proliferation; GO:0009880 embryonic pattern specification; GO:0009942 longitudinal axis specification; GO:0010654 apical cell fate commitment; GO:0048825 cotyledon development; GO:0090451 cotyledon boundary formation
KEGG
KO: K09299, K09357, K09378, K09379, K09380, K23560 | Pathway: 04550, 05202, 05206, 05215 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa03g24260PaHa03g24260.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

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eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A443PCG5 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
PaHa03g24350PaHa03g24350.1

…865 | GO:0043266 | GO:0043565 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | cytosol | regulation of DNA-templated transcription | cellular response to potassium ion | regulation of potassium ion transport | sequence-specific DNA binding

Show annotation evidence
eggNOG
Preferred name: MYBAS1 | Seed ortholog: 337451.A0A3S3Q1C7 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3398|JKX-42, Myb_DNA-binding@35493|EcW-37
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0035865 cellular response to potassium ion; GO:0043266 regulation of potassium ion transport; GO:0043565 sequence-specific DNA binding
KEGG
EC: ec:1.17.99.9 | KO: K09422 | Pathway: 00190, 00860, 01100, 01110, 01240, 04626 | Module: M00154 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred

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