Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382
Hass annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

Matches

2,418 genes for “transcription factor”

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SelectGeneMatched annotationEvidenceActions
PaHa04g01190PaHa04g01190.1

PaHa04g01190 | PaHa04g01190.1 | BAD1 | 337451.A0A3S3N3A3 | Ank_2@131567|B-2 | Ank_2@2759|H-4! | PGG@131567|A-1* | PGG@33090|Z-5 | S | ec:2.7.10.2 | K21435 | 00563 | 01100 | 01522 | 03440 | 04013 | 04068 | 04144 | 04320 | 04330 | 04361 | 04371 | 04658 |...

Show annotation evidence
eggNOG
Preferred name: BAD1 | Seed ortholog: 337451.A0A3S3N3A3 | COG: S | eggNOG OG: Ank_2@131567|B-2, Ank_2@2759|H-4!, PGG@131567|A-1*, PGG@33090|Z-5
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000724 double-strand break repair via homologous recombination; GO:0001554 luteolysis; GO:0001568 blood vessel development; GO:0001701 in utero embryonic development; GO:0001708 cell fate specification; GO:0001709 cell fate determination; GO:0001745 compound eye morphogenesis; GO:0001756 somitogenesis; GO:0001822...
KEGG
EC: ec:2.7.10.2 | KO: K21435 | Pathway: 00563, 01100, 01522, 03440, 04013, 04068, 04144, 04320, 04330, 04361, 04371, 04658, 04724, 04919, 05020, 05165, 05200, 05206, 05207, 05224 | BRITE: 00001, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa04g01220PaHa04g01220.1

PaHa04g01220 | PaHa04g01220.1 | BAD1 | 337451.A0A3S3N3A3 | Ank_2@131567|B-2 | Ank_2@2759|H-4! | PGG@131567|A-1* | PGG@33090|Z-5 | S | ec:2.7.10.2 | K21435 | 00563 | 01100 | 01522 | 03440 | 04013 | 04068 | 04144 | 04320 | 04330 | 04361 | 04371 | 04658 |...

Show annotation evidence
eggNOG
Preferred name: BAD1 | Seed ortholog: 337451.A0A3S3N3A3 | COG: S | eggNOG OG: Ank_2@131567|B-2, Ank_2@2759|H-4!, PGG@131567|A-1*, PGG@33090|Z-5
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000724 double-strand break repair via homologous recombination; GO:0001554 luteolysis; GO:0001568 blood vessel development; GO:0001701 in utero embryonic development; GO:0001708 cell fate specification; GO:0001709 cell fate determination; GO:0001745 compound eye morphogenesis; GO:0001756 somitogenesis; GO:0001822...
KEGG
EC: ec:2.7.10.2 | KO: K21435 | Pathway: 00563, 01100, 01522, 03440, 04013, 04068, 04144, 04320, 04330, 04361, 04371, 04658, 04724, 04919, 05020, 05165, 05200, 05206, 05207, 05224 | BRITE: 00001, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa04g01230PaHa04g01230.1

PaHa04g01230 | PaHa04g01230.1 | BAD1 | 337451.A0A3S3N3A3 | Ank_2@131567|B-2 | Ank_2@2759|H-4! | PGG@131567|A-1* | PGG@33090|Z-5 | S | ec:2.7.10.2 | K21435 | 00563 | 01100 | 01522 | 03440 | 04013 | 04068 | 04144 | 04320 | 04330 | 04361 | 04371 | 04658 |...

Show annotation evidence
eggNOG
Preferred name: BAD1 | Seed ortholog: 337451.A0A3S3N3A3 | COG: S | eggNOG OG: Ank_2@131567|B-2, Ank_2@2759|H-4!, PGG@131567|A-1*, PGG@33090|Z-5
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000724 double-strand break repair via homologous recombination; GO:0001554 luteolysis; GO:0001568 blood vessel development; GO:0001701 in utero embryonic development; GO:0001708 cell fate specification; GO:0001709 cell fate determination; GO:0001745 compound eye morphogenesis; GO:0001756 somitogenesis; GO:0001822...
KEGG
EC: ec:2.7.10.2 | KO: K21435 | Pathway: 00563, 01100, 01522, 03440, 04013, 04068, 04144, 04320, 04330, 04361, 04371, 04658, 04724, 04919, 05020, 05165, 05200, 05206, 05207, 05224 | BRITE: 00001, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa04g01260PaHa04g01260.1

PaHa04g01260 | PaHa04g01260.1 | BAD1 | 337451.A0A3S3N3A3 | Ank_2@131567|B-2 | Ank_2@2759|H-4! | PGG@131567|A-1* | PGG@33090|Z-5 | S | ec:2.7.10.2 | K21435 | 00563 | 01100 | 01522 | 03440 | 04013 | 04068 | 04144 | 04320 | 04330 | 04361 | 04371 | 04658 |...

Show annotation evidence
eggNOG
Preferred name: BAD1 | Seed ortholog: 337451.A0A3S3N3A3 | COG: S | eggNOG OG: Ank_2@131567|B-2, Ank_2@2759|H-4!, PGG@131567|A-1*, PGG@33090|Z-5
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000724 double-strand break repair via homologous recombination; GO:0001554 luteolysis; GO:0001568 blood vessel development; GO:0001701 in utero embryonic development; GO:0001708 cell fate specification; GO:0001709 cell fate determination; GO:0001745 compound eye morphogenesis; GO:0001756 somitogenesis; GO:0001822...
KEGG
EC: ec:2.7.10.2 | KO: K21435 | Pathway: 00563, 01100, 01522, 03440, 04013, 04068, 04144, 04320, 04330, 04361, 04371, 04658, 04724, 04919, 05020, 05165, 05200, 05206, 05207, 05224 | BRITE: 00001, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa04g01660PaHa04g01660.1

…742 | GO:1990841 | GO:2000022 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | calmodulin binding | nucleus | response to bacterium | induced systemic resistance | response to abscisic acid | response to gibberellin | negative regulation o…

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eggNOG
Preferred name: WRKY11 | Seed ortholog: 337451.A0A443PL17 | COG: S | eggNOG OG: Plant_zn_clust@131567|A-1*, Plant_zn_clust@1437183|u-6!, Plant_zn_clust@3193|C-2, Plant_zn_clust@3398|O-4, WRKY@131567|A-1*, WRKY@1437183|ArP-27, WRKY@2759|CB-10, WRKY@3193|lG-20, WRKY@33090|Ic-14, WRKY@3398|zS-22
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0009617 response to bacterium; GO:0009682 induced systemic resistance; GO:0009737 response to abscisic acid; GO:0009739 response to gibberellin; GO:0009938 negative regulation of gibberellic acid mediated signaling pathway;...
KEGG
KO: K13425 | Pathway: 04016, 04626 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa04g01920PaHa04g01920.1

…ing | RNA polymerase II cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity, RNA polymerase II-specific | cis-regulatory region sequence-specific DNA binding | transcription coregulator binding | transcription corepressor binding | transcription coactivato…

Show annotation evidence
eggNOG
Preferred name: HAT9 | Seed ortholog: 337451.A0A3S3NFZ8 | COG: S | eggNOG OG: HALZ@131221|FW-14, HALZ@131567|y-8, HALZ@35493|At-10, Homeodomain@131221|HaM-32, Homeodomain@131567|XU-17, Homeodomain@2759|ACU-20!, Homeodomain@3193|NCH-36, Homeodomain@35493|BwP-25
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000781 chromosome, telomeric region; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity,...
KEGG
KO: K09338 | Pathway: 04113, 04148, 04927, 04934, 05202 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa04g02580PaHa04g02580.1

…92 | GO:1990110 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | post-embryonic development | seed germination | lateral root formation | positive regulation of embryonic development | root…

Show annotation evidence
eggNOG
Preferred name: LOC104603172 | Seed ortholog: 337451.A0A3S3NAK0 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Apr-24, AP2@33090|Xs-18, AP2@3398|CFq-27, AP2@58023|BJE-25
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009791 post-embryonic development; GO:0009845 seed germination; GO:0010311 lateral root formation; GO:0040019 positive regulation of embryonic development; GO:0048364 root development; GO:0060771...
KEGG
KO: K09285 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa04g02690PaHa04g02690.1

…-2 | S | AUX_IAA_60_150 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0009733 | DNA-binding transcription factor activity | protein binding | nucleus | response to auxin

Show annotation evidence
eggNOG
Preferred name: IAA33 | Seed ortholog: 337451.A0A3S3NFW1 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|B-2
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin
eggNOGGO
eggNOG-inferred
PaHa04g02830PaHa04g02830.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | mitochondrion | defense response | response to cold | response to water deprivation | response to light stimulus | response to virus | plant-type…

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eggNOG
Preferred name: RPS2 | Seed ortholog: 337451.A0A443PC39 | COG: COG4886 | eggNOG OG: LRR_8@131567|C-2!, LRR_8@3398|AAc-26, NB-ARC@131567|AC-6, NB-ARC@3398|PLX-46, NB-ARC@35493|AQS-21
GO
GO:0000166 nucleotide binding; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006952 defense response; GO:0009409 response to cold; GO:0009414 response to water...
KEGG
EC: ec:3.1.3.16 | KO: K13459 | Pathway: 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa04g02980PaHa04g02980.1

…607 | GO:0032922 | GO:0043565 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | regulation of photomorphogenesis | red light signaling pathway | nuclear speck | circadian regulation of g…

Show annotation evidence
eggNOG
Preferred name: LOC104599091 | Seed ortholog: 337451.A0A443PKU1 | COG: S | eggNOG OG: CCT@131567|A-1*, CCT@2759|Bq-8, CCT@33090|DK-9, CCT@3398|by-17, CCT@35493|MD-13, zf-B_box@2759|B-2!, zf-B_box@35493|Hk-14
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010099 regulation of photomorphogenesis; GO:0010161 red light signaling pathway; GO:0016607 nuclear speck; GO:0032922 circadian regulation of gene expression; GO:0043565 sequence-specific DNA binding
eggNOGGO
eggNOG-inferred
PaHa04g03350PaHa04g03350.1

…0001 | 01000 | Myb_DNA-bind_4_26_106 | GO:0003700 | GO:0005634 | GO:0006355 | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: LOC104608109 | Seed ortholog: 337451.A0A443P4P4 | COG: S | eggNOG OG: Myb_DNA-bind_4@131567|v-6, Myb_DNA-bind_4@2759|AN-7, Myb_DNA-bind_4@3193|sM-18, Myb_DNA-bind_4@35493|NK-14, Myb_DNA-bind_4@58023|AOc-20
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
KEGG
EC: ec:2.7.7.1, ec:2.7.7.18 | KO: K06210 | Pathway: 00760, 01100, 01240 | Module: M00115, M00912 | BRITE: 00001, 01000
eggNOGGOKEGG
eggNOG-inferred
PaHa04g03680PaHa04g03680.1

…B3_142_243 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0009733 | GO:0009908 | DNA-binding transcription factor activity | protein binding | nucleus | response to auxin | flower development

Show annotation evidence
eggNOG
Preferred name: ARF17 | Seed ortholog: 337451.A0A3S3NSU0 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|xW-20, AUX_IAA@3398|Aeu-24, Auxin_resp@131221|y-7, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3193|Aa-8, Auxin_resp@3398|Dy-12, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AqU-23, B3@33090|Id-12, B3@3398|BZk-26!
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0009908 flower development
KEGG
KO: K14486 | Pathway: 04075 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa04g03830PaHa04g03830.1

…507 | GO:0009742 | GO:0040008 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | chloroplast | brassinosteroid mediated signaling pathway | regulation of growth

Show annotation evidence
eggNOG
Preferred name: LOC107928278 | Seed ortholog: 337451.A0A3S3MWL2 | COG: S | eggNOG OG: UNK.LG8Z@131567|A-1*, UNK.LG8Z@3398|c-5
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0009507 chloroplast; GO:0009742 brassinosteroid mediated signaling pathway; GO:0040008 regulation of growth
eggNOGGO
eggNOG-inferred
PaHa04g04150PaHa04g04150.1

PaHa04g04150 | PaHa04g04150.1 | BnaCnng58340D | 4432.A0A1U8B1L1 | G-patch@131567|A-1* | G-patch@2759|F-3 | zf-CCCH_4@131567|A-1* | zf-CCCH_4@2759|N-4 | S | ec:2.1.1.215 | ec:2.1.1.216 | K00555 | K11883 | K13107 | 03008 | 00001 | 01000 | 03009 | 03016 |...

Show annotation evidence
eggNOG
Preferred name: BnaCnng58340D | Seed ortholog: 4432.A0A1U8B1L1 | COG: S | eggNOG OG: G-patch@131567|A-1*, G-patch@2759|F-3, zf-CCCH_4@131567|A-1*, zf-CCCH_4@2759|N-4
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0003674 molecular_function; GO:0005634 nucleus; GO:0007175 negative regulation of epidermal growth factor-activated receptor activity; GO:0045892 negative regulation of DNA-templated transcription
KEGG
EC: ec:2.1.1.215, ec:2.1.1.216 | KO: K00555, K11883, K13107 | Pathway: 03008 | BRITE: 00001, 01000, 03009, 03016, 03041, 03051
eggNOGGOKEGG
eggNOG-inferred
PaHa04g04240PaHa04g04240.1

…723 | GO:1901959 | GO:1904278 | transcription cis-regulatory region binding | DNA-binding transcription factor activity, RNA polymerase II-specific | DNA binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | response to water deprivation | respon…

Show annotation evidence
eggNOG
Preferred name: LOC104224544 | Seed ortholog: 337451.A0A3S3P1S8 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Bfh-26, AP2@33090|Xs-18, AP2@3398|ExS-31!
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009737 response to abscisic acid; GO:0010187...
KEGG
KO: K09285 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa04g05010PaHa04g05010.1

…e-excision repair factor 3 complex | cyclin-dependent protein kinase holoenzyme complex | transcription factor TFIIH core complex | RNA polymerase II complex binding | transcriptional start site selection at RNA polymerase II promoter | protein binding | cellular_component | nucleus | nucleoplasm | …

Show annotation evidence
eggNOG
Preferred name: LOC110790669 | Seed ortholog: 337451.A0A3S3MLS7 | COG: S | eggNOG OG: MAT1@2759|A-1
GO
GO:0000082 G1/S transition of mitotic cell cycle; GO:0000112 nucleotide-excision repair factor 3 complex; GO:0000307 cyclin-dependent protein kinase holoenzyme complex; GO:0000439 transcription factor TFIIH core complex; GO:0000993 RNA polymerase II complex binding; GO:0001174 transcriptional start site selection at RNA polymerase II promoter; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634...
KEGG
KO: K10842 | Pathway: 03022, 03420 | BRITE: 00001, 03021, 03400
eggNOGGOKEGG
eggNOG-inferred
PaHa04g05130PaHa04g05130.1

…equence-specific DNA binding | DNA-binding transcription activator activity | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to water deprivation | stomatal movement | response to nitrate | nitrate assimilation | response …

Show annotation evidence
eggNOG
Preferred name: LOC103704473 | Seed ortholog: 337451.A0A3S3P1M9 | COG: COG4715 | eggNOG OG: DBD_Tnp_Mut@131221|Ck-9, DBD_Tnp_Mut@131567|A-1*, DBD_Tnp_Mut@2759|AZ-7, MULE@131567|AQ-7, MULE@3398|AMx-21!, PB1@131567|A-1*, PB1@2759|Al-8!, SWIM@131567|Z-5
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0001216 DNA-binding transcription activator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water...
KEGG
EC: ec:3.4.19.12 | KO: K17604 | Pathway: 03083, 04016, 04075 | Module: M00081 | BRITE: 00001, 01009
eggNOGGOKEGG
eggNOG-inferred
PaHa04g05150PaHa04g05150.1

…equence-specific DNA binding | DNA-binding transcription activator activity | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to water deprivation | stomatal movement | response to nitrate | nitrate assimilation | response …

Show annotation evidence
eggNOG
Preferred name: LOC103704473 | Seed ortholog: 337451.A0A3S3P1M9 | COG: COG4715 | eggNOG OG: DBD_Tnp_Mut@131221|Ck-9, DBD_Tnp_Mut@131567|A-1*, DBD_Tnp_Mut@2759|AZ-7, MULE@131567|AQ-7, MULE@3398|AMx-21!, PB1@131567|A-1*, PB1@2759|Al-8!, SWIM@131567|Z-5
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0001216 DNA-binding transcription activator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water...
KEGG
EC: ec:3.4.19.12 | KO: K17604 | Pathway: 03083, 04016, 04075 | Module: M00081 | BRITE: 00001, 01009
eggNOGGOKEGG
eggNOG-inferred
PaHa04g05860PaHa04g05860.1

… | molecular_function | DNA binding | double-stranded telomeric DNA binding | DNA-binding transcription factor activity | telomerase activity | protein binding | nucleus | nucleoplasm | nucleolus | spindle | regulation of DNA-templated transcription | telomere maintenance via telomerase | microtubul…

Show annotation evidence
eggNOG
Preferred name: LOC109009887 | Seed ortholog: 337451.A0A443PK73 | COG: S | eggNOG OG: Myb_DNA-binding@131567|jg-21, Myb_DNA-binding@2759|uF-23
GO
GO:0000723 telomere maintenance; GO:0000781 chromosome, telomeric region; GO:0000782 telomere cap complex; GO:0000783 nuclear telomere cap complex; GO:0001650 fibrillar center; GO:0001673 male germ cell nucleus; GO:0001701 in utero embryonic development; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003691 double-stranded telomeric DNA binding; GO:0003700 DNA-binding transcription factor activity; GO...
KEGG
KO: K09420, K11110, K11111, K21769 | BRITE: 00001, 03000, 03032
eggNOGGOKEGG
eggNOG-inferred
PaHa04g06000PaHa04g06000.1

…767 | GO:0055046 | GO:0080147 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | pollen sperm cell differentiation | root hair cell differentiation | root hair elongation | microgametogen…

Show annotation evidence
eggNOG
Preferred name: BHLH69 | Seed ortholog: 337451.A0A3S3QVD6 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|CEh-24, HLH@33090|AbH-19
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0048235 pollen sperm cell differentiation; GO:0048765 root hair cell differentiation; GO:0048767 root hair elongation; GO:0055046 microgametogenesis; GO:0080147 root hair cell development
eggNOGGO
eggNOG-inferred
PaHa04g06110PaHa04g06110.1

…nse to molecule of bacterial origin | response to molecule of fungal origin | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | regulation of DNA-templated transcription | defense response | response to cold | response to water deprivation | response to wounding | r…

Show annotation evidence
eggNOG
Preferred name: WRKY40 | Seed ortholog: 337451.A0A3S3NA14 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Ea-12, WRKY@3398|QN-16, WRKY@35493|Io-14
GO
GO:0000976 transcription cis-regulatory region binding; GO:0002237 response to molecule of bacterial origin; GO:0002238 response to molecule of fungal origin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0006952 defense response; GO:0009409 response to cold; GO:0009414 response to...
eggNOGGO
eggNOG-inferred
PaHa04g06270PaHa04g06270.1

… regulator activity | phosphorelay signal transduction system | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | response to water deprivation | chloroplast | response to cytokinin | cytokinin-activated signaling pathway | regulation of root meristem …

Show annotation evidence
eggNOG
Preferred name: ARR12 | Seed ortholog: 337451.A0A3S3MW85 | COG: S | eggNOG OG: Myb_DNA-binding@131567|Se-18, Myb_DNA-binding@33090|BNt-31, Myb_DNA-binding@3398|Bho-32, Response_reg|AT38GL@131567, Response_reg|AT38GL@1437183, Response_reg|AT38GL@2759, Response_reg|AT38GL@33090
GO
GO:0000156 phosphorelay response regulator activity; GO:0000160 phosphorelay signal transduction system; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009414 response to water deprivation; GO:0009507 chloroplast; GO:0009735 response to cytokinin; GO:0009736 cytokinin-activated signaling pathway; GO:0010082...
KEGG
KO: K14491 | Pathway: 04075 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa04g06480PaHa04g06480.1

…98|Wi-18 | S | AP2_7_56 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0009873 | DNA-binding transcription factor activity | protein binding | nucleus | ethylene-activated signaling pathway

Show annotation evidence
eggNOG
Preferred name: LOC100830736 | Seed ortholog: 337451.A0A3S3N9Y0 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@3193|Nj-16, AP2@33090|Hu-14, AP2@3398|Wi-18
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009873 ethylene-activated signaling pathway
eggNOGGO
eggNOG-inferred
PaHa04g06490PaHa04g06490.1

PaHa04g06490 | PaHa04g06490.1 | MCM5 | 337451.A0A443PJY9 | MCM@131567|Ap-13 | MCM_N@131567|m-8 | MCM_N@2759|AS-10 | MCM_OB@131567|O-4 | MCM_OB@2759|t-6 | MCM_lid@131567|BN-9 | MCM_lid@2759|CS-10 | COG1241 | ec:5.6.2.3 | K02209 | 03030 | 00001 | 01000 |...

Show annotation evidence
eggNOG
Preferred name: MCM5 | Seed ortholog: 337451.A0A443PJY9 | COG: COG1241 | eggNOG OG: MCM@131567|Ap-13, MCM_N@131567|m-8, MCM_N@2759|AS-10, MCM_OB@131567|O-4, MCM_OB@2759|t-6, MCM_lid@131567|BN-9, MCM_lid@2759|CS-10
GO
GO:0000278 mitotic cell cycle; GO:0000347 THO complex; GO:0000712 resolution of meiotic recombination intermediates; GO:0000727 double-strand break repair via break-induced replication; GO:0000785 chromatin; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006260 DNA replication; GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication; GO:0006270 DNA...
KEGG
EC: ec:5.6.2.3 | KO: K02209 | Pathway: 03030 | BRITE: 00001, 01000, 03032, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa04g06700PaHa04g06700.1

…GO:0005515 | GO:0005634 | GO:0005829 | GO:0009416 | GO:0009722 | GO:0071345 | DNA-binding transcription factor activity | protein binding | nucleus | cytosol | response to light stimulus | detection of cytokinin stimulus | cellular response to cytokine stimulus

Show annotation evidence
eggNOG
Preferred name: KNAT3 | Seed ortholog: 337451.A0A443PJZ8 | COG: S | eggNOG OG: ELK@131567|A-1*, ELK@33090|B-2, ELK@3398|ES-12, Homeobox_KN@131567|A-1*, Homeobox_KN@2759|B-2, Homeobox_KN@3193|CA-10, Homeobox_KN@3398|hs-20, KNOX1@131567|A-1*, KNOX1@33090|C-2, KNOX1@3398|CI-11, KNOX2@131567|A-1*, KNOX2@3193|M-4, KNOX2@35493|C-2, KNOX2@58023|QK-16
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0009416 response to light stimulus; GO:0009722 detection of cytokinin stimulus; GO:0071345 cellular response to cytokine stimulus
eggNOGGO
eggNOG-inferred
PaHa04g07470PaHa04g07470.1

PaHa04g07470 | PaHa04g07470.1 | BnaC09g18320D | 218851.A0A2G5DN79 | Sedlin_N@131221|WH-19 | Sedlin_N@131567|A-1* | Sedlin_N@2759|C-2 | S | K20301 | 00001 | 04131 | Sedlin_N_9_133 | GO:0000407 | GO:0001222 | GO:0001501 | GO:0003674 | GO:0005085 | GO:0005515 ...

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eggNOG
Preferred name: BnaC09g18320D | Seed ortholog: 218851.A0A2G5DN79 | COG: S | eggNOG OG: Sedlin_N@131221|WH-19, Sedlin_N@131567|A-1*, Sedlin_N@2759|C-2
GO
GO:0000407 phagophore assembly site; GO:0001222 transcription corepressor binding; GO:0001501 skeletal system development; GO:0003674 molecular_function; GO:0005085 guanyl-nucleotide exchange factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005640 nuclear outer membrane; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005783 endoplasmic reticulum; GO:0005793...
KEGG
KO: K20301 | BRITE: 00001, 04131
eggNOGGOKEGG
eggNOG-inferred
PaHa04g07600PaHa04g07600.1

…91 | GO:0045697 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | embryo sac development | pollen tube guidance | sequence-specific DNA binding | regulation of embryo sac central cell differ…

Show annotation evidence
eggNOG
Preferred name: MYB98 | Seed ortholog: 337451.A0A443PJU4 | eggNOG OG: Myb_DNA-binding@131567|ACl-25
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009553 embryo sac development; GO:0010183 pollen tube guidance; GO:0043565 sequence-specific DNA binding; GO:0045691 regulation of embryo sac central cell differentiation; GO:0045697 regulation of synergid...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa04g08080PaHa04g08080.1

PaHa04g08080 | PaHa04g08080.1 | LOC104598042 | 337451.A0A443NBK9 | SF3b1@2759|A-1 | S | K12828 | 03040 | 00001 | 03036 | 03041 | SF3b1_286_416 | GO:0000245 | GO:0000375 | GO:0000387 | GO:0000388 | GO:0000398 | GO:0000785 | GO:0001825 | GO:0003682 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC104598042 | Seed ortholog: 337451.A0A443NBK9 | COG: S | eggNOG OG: SF3b1@2759|A-1
GO
GO:0000245 spliceosomal complex assembly; GO:0000375 RNA splicing, via transesterification reactions; GO:0000387 spliceosomal snRNP assembly; GO:0000388 spliceosome conformational change to release U4 (or U4atac) and U1 (or U11); GO:0000398 mRNA splicing, via spliceosome; GO:0000785 chromatin; GO:0001825 blastocyst formation; GO:0003682 chromatin binding; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0005515...
KEGG
KO: K12828 | Pathway: 03040 | BRITE: 00001, 03036, 03041
eggNOGGOKEGG
eggNOG-inferred
PaHa04g08130PaHa04g08130.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: LOC108511758 | Seed ortholog: 337451.A0A443NMC1 | COG: COG5635 | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GNn-36, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|Sa-12
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K14497, K16225, K16226 | Pathway: 04016, 04075, 04626 | BRITE: 00001, 01000
eggNOGGOKEGG
eggNOG-inferred
PaHa04g08210PaHa04g08210.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: LOC104592198 | Seed ortholog: 337451.A0A3S3N7X7 | COG: COG5635 | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@3398|Dli-32, NB-ARC@35493|Ary-24, NB-ARC@58023|BfR-27
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K13457 | Pathway: 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred

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