Functional Annotation Search

Functional discovery

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382: Hass annotations
3+: indexed evidence types

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2,418 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select PaHa10g04030	PaHa10g04030`PaHa10g04030.1`	…ignaling pathway \| muscle system process \| molecular_function \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| biolog… Show annotation evidence eggNOG Preferred name: LOC104589427 \| Seed ortholog: 337451.A0A3S3QAY4 \| COG: S \| eggNOG OG: LRR_8@131567\|AVH-27, LRR_8@1437183\|EXU-34, LRR_8@2759\|BEA-29, NB-ARC@131567\|AC-6, NB-ARC@3398\|KLY-41, NB-ARC@35493\|AQS-21 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003012 muscle system process; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein... KEGG EC: ec:3.1.3.16 \| KO: K13459, K19613 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g04230	PaHa10g04230`PaHa10g04230.1`	…ignaling pathway \| muscle system process \| molecular_function \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| biolog… Show annotation evidence eggNOG Preferred name: LOC104589427 \| Seed ortholog: 337451.A0A3S3QAY4 \| COG: S \| eggNOG OG: LRR_8@131567\|AVH-27, LRR_8@1437183\|EXU-34, LRR_8@2759\|BEA-29, NB-ARC@131567\|AC-6, NB-ARC@3398\|KLY-41, NB-ARC@35493\|AQS-21 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003012 muscle system process; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein... KEGG EC: ec:3.1.3.16 \| KO: K13459, K19613 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g04330	PaHa10g04330`PaHa10g04330.1`	…ignaling pathway \| muscle system process \| molecular_function \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| biolog… Show annotation evidence eggNOG Preferred name: LOC104589427 \| Seed ortholog: 337451.A0A3S3QAY4 \| COG: S \| eggNOG OG: LRR_8@131567\|AVH-27, LRR_8@1437183\|EXU-34, LRR_8@2759\|BEA-29, NB-ARC@131567\|AC-6, NB-ARC@3398\|KLY-41, NB-ARC@35493\|AQS-21 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003012 muscle system process; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein... KEGG EC: ec:3.1.3.16 \| KO: K13459, K19613 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g04880	PaHa10g04880`PaHa10g04880.1`	…atrioventricular bundle cell differentiation \| cardiac atrium morphogenesis \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| regulation of transcription by RNA polymerase II \| spermatogenesis \| regulation of mitotic cell cycle \| de… Show annotation evidence eggNOG Preferred name: BLH1 \| Seed ortholog: 337451.A0A3S3PSZ1 \| COG: S \| eggNOG OG: Homeobox_KN@131567\|A-1, Homeobox_KN@1437183\|dZ-19, Homeobox_KN@2759\|C-2!, Homeobox_KN@3398\|Ja-14, Homeobox_KN@58023\|Dh-11, POX@131567\|A-1, POX@1437183\|Em-15, POX@3193\|W-7, POX@3398\|s-9 GO GO:0000082 G1/S transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000281 mitotic cytokinesis; GO:0001525 angiogenesis; GO:0001654 eye development; GO:0001656 metanephros development; GO:0001700 embryonic development via the syncytial blastoderm; GO:0001742 oenocyte differentiation; GO:0001745 compound eye morphogenesis; GO:0001752 compound eye photoreceptor... KEGG EC: ec:2.1.1.354 \| KO: K09355, K09359, K15610, K15611, K15613, K16670, K16671, K16672, K19383, K19553, K19554, K22748, K24889, K24890, K24891 \| Pathway: 00310, 01100, 04113, 04148, 04350, 04391, 04550, 05202 \| BRITE: 00001, 01000, 03000, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g04930	PaHa10g04930`PaHa10g04930.1`	… transcription activator activity, RNA polymerase II-specific \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| spindle \| regulation of DNA-templated transcription \| negative regulation of cell population proliferation \| phragmoplast \| response to fungus \| respo… Show annotation evidence eggNOG Preferred name: MYB3R4 \| Seed ortholog: 337451.A0A443NXB7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AWj-28, Myb_DNA-binding@2759\|AhA-29 GO GO:0000976 transcription cis-regulatory region binding; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005819 spindle; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0009524... KEGG KO: K09420 \| Pathway: 04151, 04218 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g04940	PaHa10g04940`PaHa10g04940.1`	…atrioventricular bundle cell differentiation \| cardiac atrium morphogenesis \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| regulation of transcription by RNA polymerase II \| spermatogenesis \| regulation of mitotic cell cycle \| de… Show annotation evidence eggNOG Preferred name: BLH1 \| Seed ortholog: 337451.A0A3S3PSZ1 \| COG: S \| eggNOG OG: Homeobox_KN@131567\|A-1, Homeobox_KN@1437183\|dZ-19, Homeobox_KN@2759\|C-2!, Homeobox_KN@3398\|Ja-14, Homeobox_KN@58023\|Dh-11, POX@131567\|A-1, POX@1437183\|Em-15, POX@3193\|W-7, POX@3398\|s-9 GO GO:0000082 G1/S transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000281 mitotic cytokinesis; GO:0001525 angiogenesis; GO:0001654 eye development; GO:0001656 metanephros development; GO:0001700 embryonic development via the syncytial blastoderm; GO:0001742 oenocyte differentiation; GO:0001745 compound eye morphogenesis; GO:0001752 compound eye photoreceptor... KEGG EC: ec:2.1.1.354 \| KO: K09355, K09359, K15610, K15611, K15613, K16670, K16671, K16672, K19383, K19553, K19554, K22748, K24889, K24890, K24891 \| Pathway: 00310, 01100, 04113, 04148, 04350, 04391, 04550, 05202 \| BRITE: 00001, 01000, 03000, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g05330	PaHa10g05330`PaHa10g05330.1`	…atrioventricular bundle cell differentiation \| cardiac atrium morphogenesis \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| regulation of transcription by RNA polymerase II \| spermatogenesis \| regulation of mitotic cell cycle \| de… Show annotation evidence eggNOG Preferred name: BLH1 \| Seed ortholog: 337451.A0A3S3PSZ1 \| COG: S \| eggNOG OG: Homeobox_KN@131567\|A-1, Homeobox_KN@1437183\|dZ-19, Homeobox_KN@2759\|C-2!, Homeobox_KN@3398\|Ja-14, Homeobox_KN@58023\|Dh-11, POX@131567\|A-1, POX@1437183\|Em-15, POX@3193\|W-7, POX@3398\|s-9 GO GO:0000082 G1/S transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000281 mitotic cytokinesis; GO:0001525 angiogenesis; GO:0001654 eye development; GO:0001656 metanephros development; GO:0001700 embryonic development via the syncytial blastoderm; GO:0001742 oenocyte differentiation; GO:0001745 compound eye morphogenesis; GO:0001752 compound eye photoreceptor... KEGG EC: ec:2.1.1.354 \| KO: K09355, K09359, K15610, K15611, K15613, K16670, K16671, K16672, K19383, K19553, K19554, K22748, K24889, K24890, K24891 \| Pathway: 00310, 01100, 04113, 04148, 04350, 04391, 04550, 05202 \| BRITE: 00001, 01000, 03000, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g05420	PaHa10g05420`PaHa10g05420.1`	…atrioventricular bundle cell differentiation \| cardiac atrium morphogenesis \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| regulation of transcription by RNA polymerase II \| spermatogenesis \| regulation of mitotic cell cycle \| de… Show annotation evidence eggNOG Preferred name: BLH1 \| Seed ortholog: 337451.A0A3S3PSZ1 \| COG: S \| eggNOG OG: Homeobox_KN@131567\|A-1, Homeobox_KN@1437183\|dZ-19, Homeobox_KN@2759\|C-2!, Homeobox_KN@3398\|Ja-14, Homeobox_KN@58023\|Dh-11, POX@131567\|A-1, POX@1437183\|Em-15, POX@3193\|W-7, POX@3398\|s-9 GO GO:0000082 G1/S transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000281 mitotic cytokinesis; GO:0001525 angiogenesis; GO:0001654 eye development; GO:0001656 metanephros development; GO:0001700 embryonic development via the syncytial blastoderm; GO:0001742 oenocyte differentiation; GO:0001745 compound eye morphogenesis; GO:0001752 compound eye photoreceptor... KEGG EC: ec:2.1.1.354 \| KO: K09355, K09359, K15610, K15611, K15613, K16670, K16671, K16672, K19383, K19553, K19554, K22748, K24889, K24890, K24891 \| Pathway: 00310, 01100, 04113, 04148, 04350, 04391, 04550, 05202 \| BRITE: 00001, 01000, 03000, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g05570	PaHa10g05570`PaHa10g05570.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3NEU0 \| COG: COG4886 \| eggNOG OG: LRR_8@131567\|C-2!, LRR_8@1437183\|AMP-27, LRR_8@3398\|Fa-15, NB-ARC@131567\|AC-6, NB-ARC@1437183\|KFz-41!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|ai-13 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K13459, K14497, K16225, K16226 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001, 01000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g05590	PaHa10g05590`PaHa10g05590.1`	…737 \| GO:0005829 \| GO:0006355 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| cytoplasm \| cytosol \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: POSF21 \| Seed ortholog: 337451.A0A3S3P9Y8 \| COG: S \| eggNOG OG: bZIP_1@131567\|BO-8!, bZIP_1@3193\|Afi-26, bZIP_1@33090\|QU-15, bZIP_1@3398\|BHr-28, bZIP_1@35493\|ATZ-25 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription KEGG KO: K09043 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g05600	PaHa10g05600`PaHa10g05600.1`	…737 \| GO:0005829 \| GO:0006355 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| cytoplasm \| cytosol \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: LOC103706037 \| Seed ortholog: 52838.A0A4V6T3Y1 \| COG: S \| eggNOG OG: bZIP_1@131567\|BO-8!, bZIP_1@3193\|Afi-26, bZIP_1@33090\|QU-15, bZIP_1@3398\|BHr-28, bZIP_1@35493\|ATZ-25, bZIP_1@4640\|FmP-38 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription KEGG KO: K09043 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g05610	PaHa10g05610`PaHa10g05610.1`	… II \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| TFIID-class transcription factor complex binding \| DNA-binding transcription activator activity, RNA polymerase II-specific \| molecular_function \| chromatin binding \| DNA-binding transcription factor activity \| protein bin… Show annotation evidence eggNOG Preferred name: LOC104599872 \| Seed ortholog: 337451.A0A3S3QFX8 \| COG: S \| eggNOG OG: bZIP_2@131567\|Fg-13, bZIP_2@2759\|Sb-17 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0001094 TFIID-class transcription factor complex binding; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO... KEGG KO: K20557 \| Pathway: 04016 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g05730	PaHa10g05730`PaHa10g05730.1`	…497 \| GO:0052541 \| GO:2000144 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| trichome morphogenesis \| seed coat development \| mucilage biosynthetic process involved in seed coat development \| maintenance of floral organ identit… Show annotation evidence eggNOG Preferred name: LOC104610873 \| Seed ortholog: 337451.A0A3S4PQ59 \| COG: S \| eggNOG OG: Homeodomain@131567\|Fe-12, Homeodomain@1437183\|Keq-34, Homeodomain@3193\|EBq-28, Homeodomain@3398\|Hxc-32, Homeodomain@35493\|DQH-27, START@131567\|e-5, START@2759\|CM-9!, START@3398\|AyK-24, START@35493\|eI-17 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010090 trichome morphogenesis; GO:0010214 seed coat development; GO:0048354 mucilage biosynthetic process involved in seed coat development; GO:0048497 maintenance of floral organ identity; GO:0052541 plant-type cell wall cellulose metabolic process; GO... KEGG KO: K09338 \| Pathway: 04814 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g05740	PaHa10g05740`PaHa10g05740.1`	PaHa10g05740 \| PaHa10g05740.1 \| LOC107914764 \| 93759.A0A1R3GBQ7 \| FKBP_C@131567\|Oe-14 \| FKBP_C@1437183\|SCU-40 \| FKBP_C@2759\|AAG-21! \| FKBP_C@3398\|IZV-33 \| FKBP_C@3629\|ZYB-47 \| TPR_8@131567\|Uz-14 \| TPR_8@1437183\|cUI-35 \| TPR_8@1437201\|iOF-38 \| TPR_8@2759\|GiN... Show annotation evidence eggNOG Preferred name: LOC107914764 \| Seed ortholog: 93759.A0A1R3GBQ7 \| COG: S \| eggNOG OG: FKBP_C@131567\|Oe-14, FKBP_C@1437183\|SCU-40, FKBP_C@2759\|AAG-21!, FKBP_C@3398\|IZV-33, FKBP_C@3629\|ZYB-47, TPR_8@131567\|Uz-14, TPR_8@1437183\|cUI-35, TPR_8@1437201\|iOF-38, TPR_8@2759\|GiN-24 GO GO:0000086 G2/M transition of mitotic cell cycle; GO:0000413 protein peptidyl-prolyl isomerization; GO:0000724 double-strand break repair via homologous recombination; GO:0000747 conjugation with cellular fusion; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0003755 peptidyl-prolyl cis-trans isomerase activity; GO... KEGG EC: ec:5.2.1.8 \| KO: K09571 \| Pathway: 00100, 01100, 01110, 03015, 04915 \| Module: M00101, M00917 \| BRITE: 00001, 01000, 03110	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g06060	PaHa10g06060`PaHa10g06060.1`	…ignaling pathway \| muscle system process \| molecular_function \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| biolog… Show annotation evidence eggNOG Preferred name: LOC104589427 \| Seed ortholog: 337451.A0A3S3N0G0 \| COG: S \| eggNOG OG: LRR_8@131567\|AVH-27, LRR_8@1437183\|EXU-34, LRR_8@2759\|BEA-29, NB-ARC@131567\|AC-6, NB-ARC@3398\|KLY-41, NB-ARC@35493\|AQS-21 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003012 muscle system process; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein... KEGG EC: ec:3.1.3.16 \| KO: K13459, K19613 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g06100	PaHa10g06100`PaHa10g06100.1`	…EQLE_45_69 \| GO:0003700 \| GO:0005515 \| GO:0005575 \| GO:0006355 \| GO:2000762 \| DNA-binding transcription factor activity \| protein binding \| cellular_component \| regulation of DNA-templated transcription \| regulation of phenylpropanoid metabolic process Show annotation evidence eggNOG Preferred name: LOC107766041 \| Seed ortholog: 79200.A0A166IXG9 \| COG: S \| eggNOG OG: Myb_CC_LHEQLE@131567\|A-1*, Myb_CC_LHEQLE@3193\|Z-8, Myb_CC_LHEQLE@33090\|S-7, Myb_CC_LHEQLE@3398\|i-9 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0006355 regulation of DNA-templated transcription; GO:2000762 regulation of phenylpropanoid metabolic process KEGG EC: ec:6.3.4.5 \| KO: K01940 \| Pathway: 00220, 00250, 01100, 01110, 01230 \| Module: M00029, M00844, M00845, M00978 \| BRITE: 00001, 01000, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g06370	PaHa10g06370`PaHa10g06370.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: LOC116214211 \| Seed ortholog: 337451.A0A3S3NEG9 \| COG: COG4886 \| eggNOG OG: LRR_8@131567\|C-2!, LRR_8@1437183\|AAZ-26, LRR_8@3398\|qr-25, NB-ARC@131567\|AC-6, NB-ARC@3398\|PLY-46, NB-ARC@35493\|AQS-21 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K13459 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g06410	PaHa10g06410`PaHa10g06410.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: LOC116214211 \| Seed ortholog: 337451.A0A3S3N6T7 \| COG: COG4886 \| eggNOG OG: LRR_8@131567\|C-2!, LRR_8@1437183\|AAZ-26, LRR_8@3398\|qr-25, NB-ARC@131567\|AC-6, NB-ARC@3398\|PLY-46, NB-ARC@35493\|AQS-21 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K13459 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g06490	PaHa10g06490`PaHa10g06490.1`	… \| GO:0090696 \| GO:0141044 \| GO:2000014 \| transcription corepressor binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| chromatin silencing complex \| response to cold \| embryo development ending in seed dormancy \| flower development \| negative regulation of flower devel… Show annotation evidence eggNOG Preferred name: LOC104604911 \| Seed ortholog: 337451.A0A3S3NJL5 \| COG: S \| eggNOG OG: WD40@131567\|xz-17, WD40@2759\|Pnf-31 GO GO:0001222 transcription corepressor binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005677 chromatin silencing complex; GO:0009409 response to cold; GO:0009793 embryo development ending in seed dormancy; GO:0009908 flower development; GO:0009910 negative regulation of flower development; GO:0009960 endosperm development; GO:0010048 vernalization... KEGG KO: K11462 \| Pathway: 03083 \| BRITE: 00001, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g06500	PaHa10g06500`PaHa10g06500.1`	PaHa10g06500 \| PaHa10g06500.1 \| LOC104604910 \| 337451.A0A443PBT8 \| Ank_2@131567\|BN-7 \| Ank_2@2759\|hc-12 \| Ank_4@131567\|GW-15 \| Ank_4@1437183\|IFX-31 \| PGG@131567\|A-1* \| PGG@3193\|DB-9 \| PGG@33090\|a-5 \| PGG@3398\|kI-19 \| S \| K15503 \| 04080 \| 04218 \| 04621 \|... Show annotation evidence eggNOG Preferred name: LOC104604910 \| Seed ortholog: 337451.A0A443PBT8 \| COG: S \| eggNOG OG: Ank_2@131567\|BN-7, Ank_2@2759\|hc-12, Ank_4@131567\|GW-15, Ank_4@1437183\|IFX-31, PGG@131567\|A-1*, PGG@3193\|DB-9, PGG@33090\|a-5, PGG@3398\|kI-19 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001659 temperature homeostasis; GO:0001660 fever generation; GO:0001774 microglial cell activation; GO:0001964 startle response; GO:0002024 diet induced thermogenesis; GO:0002790 peptide secretion; GO:0003085 negative regulation of systemic arterial blood pressure; GO:0003674 molecular_function; GO:0006629 lipid metabolic process; GO:0006812... KEGG KO: K15503 \| Pathway: 04080, 04218, 04621, 04750, 04928, 04961, 04970, 04978, 05418 \| BRITE: 00001, 01009, 03400	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g06530	PaHa10g06530`PaHa10g06530.1`	PaHa10g06530 \| PaHa10g06530.1 \| LOC110796628 \| 337451.A0A3S3N4S8 \| Ank_2@131567\|BN-7 \| Ank_2@2759\|hc-12 \| PGG@131567\|A-1* \| PGG@3193\|DB-9 \| PGG@33090\|a-5 \| PGG@3398\|kI-19 \| S \| K04971 \| K04972 \| K04973 \| K04974 \| K04975 \| K04984 \| K05222 \| K15503 \| 04080 \|... Show annotation evidence eggNOG Preferred name: LOC110796628 \| Seed ortholog: 337451.A0A3S3N4S8 \| COG: S \| eggNOG OG: Ank_2@131567\|BN-7, Ank_2@2759\|hc-12, PGG@131567\|A-1*, PGG@3193\|DB-9, PGG@33090\|a-5, PGG@3398\|kI-19 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001659 temperature homeostasis; GO:0001660 fever generation; GO:0001774 microglial cell activation; GO:0001964 startle response; GO:0002024 diet induced thermogenesis; GO:0002790 peptide secretion; GO:0003085 negative regulation of systemic arterial blood pressure; GO:0003674 molecular_function; GO:0004888 transmembrane signaling receptor... KEGG KO: K04971, K04972, K04973, K04974, K04975, K04984, K05222, K15503 \| Pathway: 04080, 04218, 04621, 04750, 04928, 04961, 04970, 04978, 05418 \| BRITE: 00001, 01009, 03400, 04040	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g06540	PaHa10g06540`PaHa10g06540.1`	PaHa10g06540 \| PaHa10g06540.1 \| LOC110796628 \| 337451.A0A3S3N4S8 \| Ank_2@131567\|BN-7 \| Ank_2@2759\|hc-12 \| PGG@131567\|A-1* \| PGG@3193\|DB-9 \| PGG@33090\|a-5 \| PGG@3398\|kI-19 \| S \| K04971 \| K04972 \| K04973 \| K04974 \| K04975 \| K04984 \| K05222 \| K15503 \| 04080 \|... Show annotation evidence eggNOG Preferred name: LOC110796628 \| Seed ortholog: 337451.A0A3S3N4S8 \| COG: S \| eggNOG OG: Ank_2@131567\|BN-7, Ank_2@2759\|hc-12, PGG@131567\|A-1*, PGG@3193\|DB-9, PGG@33090\|a-5, PGG@3398\|kI-19 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001659 temperature homeostasis; GO:0001660 fever generation; GO:0001774 microglial cell activation; GO:0001964 startle response; GO:0002024 diet induced thermogenesis; GO:0002790 peptide secretion; GO:0003085 negative regulation of systemic arterial blood pressure; GO:0003674 molecular_function; GO:0004888 transmembrane signaling receptor... KEGG KO: K04971, K04972, K04973, K04974, K04975, K04984, K05222, K15503 \| Pathway: 04080, 04218, 04621, 04750, 04928, 04961, 04970, 04978, 05418 \| BRITE: 00001, 01009, 03400, 04040	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g06580	PaHa10g06580`PaHa10g06580.1`	… \| defense response to oomycetes \| response to molecule of bacterial origin \| DNA-binding transcription factor activity \| protein binding \| calmodulin binding \| nucleus \| mitochondrion \| regulation of DNA-templated transcription \| chloroplast \| response to bacterium \| response to fungus \| salicylic … Show annotation evidence eggNOG Preferred name: CBP60B \| Seed ortholog: 337451.A0A443PUZ2 \| COG: S \| eggNOG OG: Calmod_bind_M@131567\|A-1, Calmod_bind_M@35493\|G-3!, Calmodulin_bind@131567\|A-1, Calmodulin_bind@33090\|O-4! GO GO:0002229 defense response to oomycetes; GO:0002237 response to molecule of bacterial origin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006355 regulation of DNA-templated transcription; GO:0009507 chloroplast; GO:0009617 response to bacterium; GO:0009620 response to fungus; GO:0009697 salicylic...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g06710	PaHa10g06710`PaHa10g06710.1`	…629 \| GO:0048579 \| GO:2000032 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| biological_process \| negative regulation of gene expression \| negative regulation of long-day photoperiodi… Show annotation evidence eggNOG Preferred name: COL12 \| Seed ortholog: 337451.A0A443PRR0 \| COG: S \| eggNOG OG: CCT@131567\|A-1*, CCT@2759\|t-6, CCT@3193\|Ga-11, CCT@3398\|Oh-14 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008150 biological_process; GO:0010629 negative regulation of gene expression; GO:0048579 negative regulation of long-day photoperiodism, flowering; GO:2000032 regulation of secondary shoot formation	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g06920	PaHa10g06920`PaHa10g06920.1`	…O:0005737 \| GO:0008284 \| GO:0009733 \| GO:0032876 \| GO:0042023 \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| positive regulation of cell population proliferation \| response to auxin \| negative regulation of DNA endoreduplication \| DNA endoreduplic… Show annotation evidence eggNOG Preferred name: E2FE \| Seed ortholog: 337451.A0A443NGA2 \| eggNOG OG: E2F_TDP@131567\|s-6 GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008284 positive regulation of cell population proliferation; GO:0009733 response to auxin; GO:0032876 negative regulation of DNA endoreduplication; GO:0042023 DNA endoreduplication KEGG KO: K09391 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g07020	PaHa10g07020`PaHa10g07020.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| mitochondrion \| defense response \| response to cold \| response to water deprivation \| response to light stimulus \| response to virus \| plant-type… Show annotation evidence eggNOG Preferred name: RPS2 \| Seed ortholog: 337451.A0A443PRT1 \| COG: COG4886 \| eggNOG OG: LRR_8@131567\|C-2!, LRR_8@3398\|AAc-26, NB-ARC@131567\|AC-6, NB-ARC@3398\|PLX-46, NB-ARC@35493\|AQS-21 GO GO:0000166 nucleotide binding; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006952 defense response; GO:0009409 response to cold; GO:0009414 response to water... KEGG EC: ec:3.1.3.16 \| KO: K13459 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g07030	PaHa10g07030`PaHa10g07030.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| mitochondrion \| defense response \| response to cold \| response to water deprivation \| response to light stimulus \| response to virus \| plant-type… Show annotation evidence eggNOG Preferred name: RPS2 \| Seed ortholog: 337451.A0A443PRT1 \| COG: COG4886 \| eggNOG OG: LRR_8@131567\|C-2!, LRR_8@3398\|AAc-26, NB-ARC@131567\|AC-6, NB-ARC@3398\|PLX-46, NB-ARC@35493\|AQS-21 GO GO:0000166 nucleotide binding; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006952 defense response; GO:0009409 response to cold; GO:0009414 response to water... KEGG EC: ec:3.1.3.16 \| KO: K13459 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g07360	PaHa10g07360`PaHa10g07360.1`	…@33090\|AbJ-19 \| HLH@3398\|Bmz-23 \| S \| HLH_192_232 \| GO:0003700 \| GO:0005634 \| DNA-binding transcription factor activity \| nucleus Show annotation evidence eggNOG Preferred name: LOC107886911 \| Seed ortholog: 337451.A0A443PRW8 \| COG: S \| eggNOG OG: HLH@131221\|AqD-20, HLH@131567\|Zg-14!, HLH@33090\|AbJ-19, HLH@3398\|Bmz-23 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g08320	PaHa10g08320`PaHa10g08320.1`	PaHa10g08320 \| PaHa10g08320.1 \| TIF3B1 \| 337451.A0A3S3R0Q9 \| RRM_1@131567\|Gk-13 \| RRM_1@2759\|hZ-20 \| eIF2A@131567\|C-2 \| COG0823 \| K03253 \| 00001 \| 03012 \| 03019 \| RRM_1_83_138 \| eIF2A_407_607 \| GO:0001732 \| GO:0002183 \| GO:0003313 \| GO:0003743 \| GO:0005515 ... Show annotation evidence eggNOG Preferred name: TIF3B1 \| Seed ortholog: 337451.A0A3S3R0Q9 \| COG: COG0823 \| eggNOG OG: RRM_1@131567\|Gk-13, RRM_1@2759\|hZ-20, eIF2A@131567\|C-2 GO GO:0001732 formation of cytoplasmic translation initiation complex; GO:0002183 cytoplasmic translational initiation; GO:0003313 heart rudiment development; GO:0003743 translation initiation factor activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0005852 eukaryotic translation initiation factor 3 complex; GO:0006396 RNA processing; GO:0006413 translational initiation; GO:0006446 regulation of... KEGG KO: K03253 \| BRITE: 00001, 03012, 03019	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa10g08410	PaHa10g08410`PaHa10g08410.1`	…970 \| GO:0009611 \| GO:0009737 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| response to osmotic stress \| response to wounding \| response to abscisic acid Show annotation evidence eggNOG Preferred name: MYB39 \| Seed ortholog: 337451.A0A443PS36 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|HJd-40, Myb_DNA-binding@33090\|FSl-38, Myb_DNA-binding@3398\|Vkj-52, Myb_DNA-binding@35493\|GNw-39, Myb_DNA-binding@58023\|IIy-41 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006970 response to osmotic stress; GO:0009611 response to wounding; GO:0009737 response to abscisic acid KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,418 genes for “transcription factor”

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