Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382
Hass annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

Matches

2,418 genes for “transcription factor”

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GO enrichmentExport FASTA
SelectGeneMatched annotationEvidenceActions
PaHa11g05490PaHa11g05490.1

PaHa11g05490 | PaHa11g05490.1 | MEL1 | 56857.A0A200R9S6 | ArgoL1@131221|jP-19 | ArgoL1@131567|A-1* | ArgoL1@2759|C-2! | ArgoL1@35493|MZ-14 | ArgoL2@131221|Ii-13 | ArgoL2@131567|A-1* | ArgoL2@1437183|iM-19 | ArgoL2@2759|C-2 | ArgoL2@3193|LN-14 | ArgoL2@35493...

Show annotation evidence
eggNOG
Preferred name: MEL1 | Seed ortholog: 56857.A0A200R9S6 | COG: S | eggNOG OG: ArgoL1@131221|jP-19, ArgoL1@131567|A-1*, ArgoL1@2759|C-2!, ArgoL1@35493|MZ-14, ArgoL2@131221|Ii-13, ArgoL2@131567|A-1*, ArgoL2@1437183|iM-19, ArgoL2@2759|C-2, ArgoL2@3193|LN-14, ArgoL2@35493|Cr-10, ArgoMid@131567|A-1*, ArgoMid@2759|An-8, ArgoMid@3193|Mc-15, ArgoN@131221|RT-15, ArgoN@131567|A-1*, ArgoN@2759|C-2!, ArgoN@3193|Ws-16, ArgoN...
GO
GO:0000340 RNA 7-methylguanosine cap binding; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000993 RNA polymerase II complex binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0003676 nucleic acid binding; GO:0003723 RNA binding; GO:0003725 double-stranded RNA binding; GO:0003727 single-stranded RNA...
KEGG
KO: K11593 | Pathway: 04320, 04361 | BRITE: 00001, 03019, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa11g05500PaHa11g05500.1

PaHa11g05500 | PaHa11g05500.1 | MEL1 | 56857.A0A200R9S6 | ArgoL1@131221|jP-19 | ArgoL1@131567|A-1* | ArgoL1@2759|C-2! | ArgoL1@35493|MZ-14 | ArgoL2@131221|Ii-13 | ArgoL2@131567|A-1* | ArgoL2@1437183|iM-19 | ArgoL2@2759|C-2 | ArgoL2@3193|LN-14 | ArgoL2@35493...

Show annotation evidence
eggNOG
Preferred name: MEL1 | Seed ortholog: 56857.A0A200R9S6 | COG: S | eggNOG OG: ArgoL1@131221|jP-19, ArgoL1@131567|A-1*, ArgoL1@2759|C-2!, ArgoL1@35493|MZ-14, ArgoL2@131221|Ii-13, ArgoL2@131567|A-1*, ArgoL2@1437183|iM-19, ArgoL2@2759|C-2, ArgoL2@3193|LN-14, ArgoL2@35493|Cr-10, ArgoMid@131567|A-1*, ArgoMid@2759|An-8, ArgoMid@3193|Mc-15, ArgoN@131221|RT-15, ArgoN@131567|A-1*, ArgoN@2759|C-2!, ArgoN@3193|Ws-16, ArgoN...
GO
GO:0000340 RNA 7-methylguanosine cap binding; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000993 RNA polymerase II complex binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0003676 nucleic acid binding; GO:0003723 RNA binding; GO:0003725 double-stranded RNA binding; GO:0003727 single-stranded RNA...
KEGG
KO: K11593 | Pathway: 04320, 04361 | BRITE: 00001, 03019, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa11g05520PaHa11g05520.1

PaHa11g05520 | PaHa11g05520.1 | AGO5 | 337451.A0A3S3N5W9 | ArgoL1@131221|jP-19 | ArgoL1@131567|A-1* | ArgoL1@2759|C-2! | ArgoL1@35493|MZ-14 | ArgoL2@131221|Ii-13 | ArgoL2@131567|A-1* | ArgoL2@2759|C-2 | ArgoL2@3193|LN-14 | ArgoL2@35493|Cr-10 | ArgoMid...

Show annotation evidence
eggNOG
Preferred name: AGO5 | Seed ortholog: 337451.A0A3S3N5W9 | COG: S | eggNOG OG: ArgoL1@131221|jP-19, ArgoL1@131567|A-1*, ArgoL1@2759|C-2!, ArgoL1@35493|MZ-14, ArgoL2@131221|Ii-13, ArgoL2@131567|A-1*, ArgoL2@2759|C-2, ArgoL2@3193|LN-14, ArgoL2@35493|Cr-10, ArgoMid@131567|A-1*, ArgoMid@2759|An-8, ArgoMid@3193|Mc-15, ArgoN@131221|RT-15, ArgoN@131567|A-1*, ArgoN@2759|C-2!, ArgoN@3193|Ws-16, ArgoN@35493|Dl-11, PAZ@131221...
GO
GO:0000340 RNA 7-methylguanosine cap binding; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000993 RNA polymerase II complex binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0003676 nucleic acid binding; GO:0003723 RNA binding; GO:0003725 double-stranded RNA binding; GO:0003727 single-stranded RNA...
KEGG
KO: K11593 | Pathway: 04320, 04361 | BRITE: 00001, 03019, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa11g05930PaHa11g05930.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3QYL4 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g05940PaHa11g05940.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3QYL4 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g05990PaHa11g05990.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3QYL4 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g06000PaHa11g06000.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3QYL4 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g06010PaHa11g06010.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3MXQ6 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g06070PaHa11g06070.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3QYL4 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g06080PaHa11g06080.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3QYL4 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g06090PaHa11g06090.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3MXQ6 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g06100PaHa11g06100.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3QYL4 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g06340PaHa11g06340.1

PaHa11g06340 | PaHa11g06340.1 | LOC109727805 | 42345.A0A2H3XLQ4 | Skp1_POZ@131567|B-2 | S | K03872 | 04120 | 00001 | 03400 | 04121 | Skp1_POZ_6_66 | GO:0000113 | GO:0000122 | GO:0001222 | GO:0003674 | GO:0003682 | GO:0003711 | GO:0004842 | GO:0005515 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC109727805 | Seed ortholog: 42345.A0A2H3XLQ4 | COG: S | eggNOG OG: Skp1_POZ@131567|B-2
GO
GO:0000113 nucleotide-excision repair factor 4 complex; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001222 transcription corepressor binding; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0003711 transcription elongation factor activity; GO:0004842 ubiquitin-protein transferase activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus;...
KEGG
KO: K03872 | Pathway: 04120 | BRITE: 00001, 03400, 04121
eggNOGGOKEGG
eggNOG-inferred
PaHa11g07470PaHa11g07470.1

PaHa11g07470 | PaHa11g07470.1 | LOC101761613 | 4615.A0A199VIQ3 | CH@131567|A-1* | CH@1437183|AjM-22 | CH@2759|HS-11 | CH@33090|ACH-19 | Kinesin@131567|A-1* | Kinesin@2759|Bid-19 | Kinesin@3193|Jja-32 | Kinesin@4447|MER-35 | S | K10406 | 04814 | 00001 |...

Show annotation evidence
eggNOG
Preferred name: LOC101761613 | Seed ortholog: 4615.A0A199VIQ3 | COG: S | eggNOG OG: CH@131567|A-1*, CH@1437183|AjM-22, CH@2759|HS-11, CH@33090|ACH-19, Kinesin@131567|A-1*, Kinesin@2759|Bid-19, Kinesin@3193|Jja-32, Kinesin@4447|MER-35
GO
GO:0001525 angiogenesis; GO:0001568 blood vessel development; GO:0001935 endothelial cell proliferation; GO:0002244 hematopoietic progenitor cell differentiation; GO:0003774 cytoskeletal motor activity; GO:0003777 microtubule motor activity; GO:0005085 guanyl-nucleotide exchange factor activity; GO:0005096 GTPase activator activity; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005547...
KEGG
KO: K10406 | Pathway: 04814 | BRITE: 00001, 04812
eggNOGGOKEGG
eggNOG-inferred
PaHa11g07500PaHa11g07500.1

…GO:0003723 | GO:0005634 | GO:0005730 | GO:0005829 | GO:0008097 | GO:0080084 | DNA-binding transcription factor activity | RNA binding | nucleus | nucleolus | cytosol | 5S rRNA binding | 5S rDNA binding

Show annotation evidence
eggNOG
Preferred name: LOC109013146 | Seed ortholog: 3476.A0A2P5CW95 | COG: S | eggNOG OG: zf-C2H2@131567|Asb-21, zf-C2H2@2759|DEq-25, zf-C2H2@3481|tFi-45
GO
GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0008097 5S rRNA binding; GO:0080084 5S rDNA binding
KEGG
KO: K09191 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
PaHa11g07970PaHa11g07970.1

…11 | regulation of alternative mRNA splicing, via spliceosome | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | nucleolus | nuclear cap binding complex | regulation of DNA-templated transcription | RNA splicing | ta-siRNA processing | nuclear dicing body | nucle…

Show annotation evidence
eggNOG
Preferred name: SE | Seed ortholog: 337451.A0A3S3QXF2 | COG: S | eggNOG OG: ARS2@2759|A-1, ARS2@3398|BB-10, SERRATE_Ars2_N@2759|A-1, SERRATE_Ars2_N@3398|Af-8
GO
GO:0000381 regulation of alternative mRNA splicing, via spliceosome; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005846 nuclear cap binding complex; GO:0006355 regulation of DNA-templated transcription; GO:0008380 RNA splicing; GO:0010267 ta-siRNA processing; GO:0010445 nuclear dicing body; GO:0016607...
KEGG
KO: K27103 | BRITE: 00001, 03019
eggNOGGOKEGG
eggNOG-inferred
PaHa11g08410PaHa11g08410.1

…tory region sequence-specific DNA binding | DNA binding | chromatin binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | pollen development | anther development | anther morphogenesis | anther wall tapetum cell differentiation …

Show annotation evidence
eggNOG
Preferred name: AMS | Seed ortholog: 337451.A0A3S3P3A8 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|FXN-30, HLH@33090|AAF-17, HLH@35493|Aps-20, bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|C-2, bHLH-MYC_N@3193|Ad-9, bHLH-MYC_N@33090|s-7
GO
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0048653 anther development; GO:0048654 anther morphogenesis; GO:0048657 anther wall tapetum...
eggNOGGO
eggNOG-inferred
PaHa11g09510PaHa11g09510.1

…737 | GO:0009744 | GO:0045892 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | mitochondrion | regulation of DNA-templated transcription | response to abscisic acid | response to sucrose | negative regulation of DNA-templated tra…

Show annotation evidence
eggNOG
Preferred name: LOC100382023 | Seed ortholog: 337451.A0A3S3Q5F4 | COG: S | eggNOG OG: B3@131567|A-1*, B3@3193|BDa-24, B3@33090|AIL-20, B3@3398|CID-29, zf-CW@131567|c-5, zf-CW@2759|BY-9, zf-CW@3193|Oq-17, zf-CW@33090|JX-15, zf-CW@3398|Vv-19
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006355 regulation of DNA-templated transcription; GO:0009737 response to abscisic acid; GO:0009744 response to sucrose; GO:0045892 negative regulation of DNA-templated transcription
KEGG
KO: K09287 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa11g09600PaHa11g09600.1

…twork | cytosol | plasma membrane | phospholipid transfer to membrane | lipid transport | transcription factor binding | lipid binding | response to water deprivation | plant-type cell wall | plasmodesma | chloroplast | chloroplast thylakoid | response to salt stress | response to abscisic acid | cu…

Show annotation evidence
eggNOG
Preferred name: NLTP2 | Seed ortholog: 337451.A0A3S3MY60 | COG: S | eggNOG OG: Tryp_alpha_amyl@131567|A-1*, Tryp_alpha_amyl@2759|Iu-12!
GO
GO:0003674 molecular_function; GO:0005516 calmodulin binding; GO:0005576 extracellular region; GO:0005768 endosome; GO:0005794 Golgi apparatus; GO:0005802 trans-Golgi network; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006649 phospholipid transfer to membrane; GO:0006869 lipid transport; GO:0008134 transcription factor binding; GO:0008289 lipid binding; GO:0009414 response to water deprivation; GO:0009505...
eggNOGGO
eggNOG-inferred
PaHa11g09610PaHa11g09610.1

…twork | cytosol | plasma membrane | phospholipid transfer to membrane | lipid transport | transcription factor binding | lipid binding | response to water deprivation | plant-type cell wall | plasmodesma | chloroplast | chloroplast thylakoid | response to salt stress | response to abscisic acid | cu…

Show annotation evidence
eggNOG
Preferred name: NLTP2 | Seed ortholog: 337451.A0A443PN67 | COG: S | eggNOG OG: Tryp_alpha_amyl@131567|A-1*, Tryp_alpha_amyl@2759|Iu-12!
GO
GO:0003674 molecular_function; GO:0005516 calmodulin binding; GO:0005576 extracellular region; GO:0005768 endosome; GO:0005794 Golgi apparatus; GO:0005802 trans-Golgi network; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006649 phospholipid transfer to membrane; GO:0006869 lipid transport; GO:0008134 transcription factor binding; GO:0008289 lipid binding; GO:0009414 response to water deprivation; GO:0009505...
eggNOGGO
eggNOG-inferred
PaHa11g09930PaHa11g09930.1

…77 | GO:1902584 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to auxin | auxin metabolic process | vegetative phase change | abaxial cell fate specification | …

Show annotation evidence
eggNOG
Preferred name: LOC104599494 | Seed ortholog: 337451.A0A443PFU2 | COG: S | eggNOG OG: Auxin_resp@131567|A-1*, Auxin_resp@2759|B-2, Auxin_resp@3398|Cm-12, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AHu-20, B3@33090|Id-12, B3@3398|BCh-24
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0009850 auxin metabolic process; GO:0010050 vegetative phase change; GO:0010158 abaxial cell fate specification; GO:0010582 floral meristem...
KEGG
KO: K14486 | Pathway: 04075 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g10140PaHa11g10140.1

PaHa11g10140 | PaHa11g10140.1 | LOC109017848 | 337451.A0A3S3N4N5 | S1@131567|yl-44 | SHS2_Rpb7-N@131567|C-2 | COG0557 | ec:2.1.1.354 | K03015 | 03020 | 03420 | 00001 | 01611 | 03019 | 03021 | 03400 | S1_78_156 | SHS2_Rpb7-N_8_64 | GO:0000288 | GO:0000956 |...

Show annotation evidence
eggNOG
Preferred name: LOC109017848 | Seed ortholog: 337451.A0A3S3N4N5 | COG: COG0557 | eggNOG OG: S1@131567|yl-44, SHS2_Rpb7-N@131567|C-2
GO
GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; GO:0000956 nuclear-transcribed mRNA catabolic process; GO:0003697 single-stranded DNA binding; GO:0003727 single-stranded RNA binding; GO:0003899 DNA-directed RNA polymerase activity; GO:0003968 RNA-directed RNA polymerase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005665 RNA polymerase II, core complex; GO...
KEGG
EC: ec:2.1.1.354 | KO: K03015 | Pathway: 03020, 03420 | BRITE: 00001, 01611, 03019, 03021, 03400
eggNOGGOKEGG
eggNOG-inferred
PaHa11g10280PaHa11g10280.1

… postsynaptic cytosol | regulation protein catabolic process at postsynapse | DNA-binding transcription factor binding | chromatin-protein adaptor activity | co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway | regulation of protein localization to nucleus | regulation o…

Show annotation evidence
eggNOG
Preferred name: PIN1 | Seed ortholog: 337451.A0A3S3QZR2 | COG: S | eggNOG OG: Rotamase@2759|B-2!
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000413 protein peptidyl-prolyl isomerization; GO:0000993 RNA polymerase II complex binding; GO:0001666 response to hypoxia; GO:0001934 positive regulation of protein phosphorylation; GO:0003674 molecular_function; GO:0003755 peptidyl-prolyl cis-trans isomerase activity; GO:0003774 cytoskeletal motor activity; GO:0005515 protein binding; GO...
KEGG
EC: ec:5.2.1.8 | KO: K09578 | Pathway: 03250 | BRITE: 00001, 01000, 03021, 03110
eggNOGGOKEGG
eggNOG-inferred
PaHa11g10310PaHa11g10310.1

…759 | GO:1901348 | GO:1990110 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | sequence-specific DNA binding | xylem vessel member cell differentiation | positive regulation of secondar…

Show annotation evidence
eggNOG
Preferred name: LOC106774689 | Seed ortholog: 337451.A0A443PNE9 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|om-16, NAM@3398|AmR-21, NAM@35493|AE-6, NAM@58023|AGB-18
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0043565 sequence-specific DNA binding; GO:0048759 xylem vessel member cell differentiation; GO:1901348 positive regulation of secondary cell wall biogenesis; GO:1990110 callus formation
eggNOGGO
eggNOG-inferred
PaHa11g10620PaHa11g10620.1

…GO:0003700 | GO:0005515 | GO:0005634 | GO:0005737 | GO:0006355 | GO:0010039 | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | regulation of DNA-templated transcription | response to iron ion

Show annotation evidence
eggNOG
Preferred name: LOC104600134 | Seed ortholog: 337451.A0A443PNI5 | COG: S | eggNOG OG: HLH@131567|Ae-7, HLH@1437183|AGV-17
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0010039 response to iron ion
KEGG
KO: K09074, K09108, K26457 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa11g11140PaHa11g11140.1

…565 | GO:0045892 | GO:1901141 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | response to wounding | sequence-specific DNA binding | negative regulation of DNA-templated transcription | regulation of lignin biosynthetic process

Show annotation evidence
eggNOG
Preferred name: MYB1 | Seed ortholog: 337451.A0A443PNM8 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|UUG-51, Myb_DNA-binding@35493|KPq-43
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009611 response to wounding; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:1901141 regulation of lignin biosynthetic process
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa11g11440PaHa11g11440.1

…GO:0006355 | GO:0009648 | GO:0009909 | GO:0009911 | GO:0045893 | GO:2000028 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | photoperiodism | regulation of flower development | positive regulation of flower development | positive r…

Show annotation evidence
eggNOG
Preferred name: FD | Seed ortholog: 4432.A0A1U8AJC8 | COG: S | eggNOG OG: bZIP_1@131567|BO-8!, bZIP_1@33090|aZ-18
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009648 photoperiodism; GO:0009909 regulation of flower development; GO:0009911 positive regulation of flower development; GO:0045893 positive regulation of DNA-templated transcription; GO:2000028 regulation of photoperiodism, flowering
KEGG
KO: K14432 | Pathway: 04075 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa11g11470PaHa11g11470.1

…tory region sequence-specific DNA binding | DNA binding | chromatin binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | pollen development | anther development | anther morphogenesis | anther wall tapetum cell differentiation …

Show annotation evidence
eggNOG
Preferred name: AMS | Seed ortholog: 337451.A0A3S3P3A8 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|FXN-30, HLH@33090|AAF-17, HLH@35493|Aps-20, bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|C-2, bHLH-MYC_N@3193|Ad-9, bHLH-MYC_N@33090|s-7
GO
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0048653 anther development; GO:0048654 anther morphogenesis; GO:0048657 anther wall tapetum...
eggNOGGO
eggNOG-inferred
PaHa11g11970PaHa11g11970.1

PaHa11g11970 | PaHa11g11970.1 | LOC123104645 | 337451.A0A443PNN1 | B56@131567|A-1* | B56@2759|C-2! | S | ec:2.1.1.297 | K11584 | 03015 | 00001 | 01009 | 03019 | 03036 | B56_32_434 | GO:0000159 | GO:0000398 | GO:0000775 | GO:0000776 | GO:0000779 | GO:0000939...

Show annotation evidence
eggNOG
Preferred name: LOC123104645 | Seed ortholog: 337451.A0A443PNN1 | COG: S | eggNOG OG: B56@131567|A-1*, B56@2759|C-2!
GO
GO:0000159 protein phosphatase type 2A complex; GO:0000398 mRNA splicing, via spliceosome; GO:0000775 chromosome, centromeric region; GO:0000776 kinetochore; GO:0000779 condensed chromosome, centromeric region; GO:0000939 inner kinetochore; GO:0001932 regulation of protein phosphorylation; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm;...
KEGG
EC: ec:2.1.1.297 | KO: K11584 | Pathway: 03015 | BRITE: 00001, 01009, 03019, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa11g12100PaHa11g12100.1

…GO:0005515 | GO:0005634 | GO:0006355 | GO:0010197 | karyogamy | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | polar nucleus fusion

Show annotation evidence
eggNOG
Preferred name: HMGB9 | Seed ortholog: 337451.A0A3S3R035 | COG: S | eggNOG OG: ARID@131567|A-1*, ARID@2759|N-4, ARID@33090|EH-11, HMG_box@131567|Aj-7, HMG_box@2759|Gn-11, HMG_box@3398|ALN-20
GO
GO:0000741 karyogamy; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010197 polar nucleus fusion
KEGG
EC: ec:2.1.1.354 | KO: K22483, K22748 | Pathway: 00310, 01100 | BRITE: 00001, 01000, 03000, 03036
eggNOGGOKEGG
eggNOG-inferred

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