Functional Annotation Search

Functional discovery

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382: Hass annotations
3+: indexed evidence types

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2,418 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select PaHa01g39820	PaHa01g39820`PaHa01g39820.1`	…GO:0005737 \| GO:0006970 \| GO:0009651 \| GO:0042538 \| GO:0042803 \| GO:1901001 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| response to osmotic stress \| response to salt stress \| hyperosmotic salinity response \| protein homodimerization activity \| negative regul… Show annotation evidence eggNOG Preferred name: LOC104613430 \| Seed ortholog: 337451.A0A443NSA5 \| COG: S \| eggNOG OG: bZIP_2@131567\|Fg-13, bZIP_2@2759\|LL-15, bZIP_2@3193\|ADC-23 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006970 response to osmotic stress; GO:0009651 response to salt stress; GO:0042538 hyperosmotic salinity response; GO:0042803 protein homodimerization activity; GO:1901001 negative regulation of response to salt stress KEGG KO: K25785 \| Pathway: 04013, 04624 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa01g40180	PaHa01g40180`PaHa01g40180.1`	…ac) and U1 (or U11) \| mRNA splicing, via spliceosome \| blastocyst formation \| DNA-binding transcription factor activity \| nucleus \| RNA processing \| biological_process \| mRNA cis splicing, via spliceosome \| U2-type prespliceosome assembly Show annotation evidence eggNOG Preferred name: LOC109113946 \| Seed ortholog: 337451.A0A3S3N5U6 \| COG: S \| eggNOG OG: RRM_1@131567\|Xz-19, RRM_1@2759\|fE-20 GO GO:0000387 spliceosomal snRNP assembly; GO:0000388 spliceosome conformational change to release U4 (or U4atac) and U1 (or U11); GO:0000398 mRNA splicing, via spliceosome; GO:0001825 blastocyst formation; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006396 RNA processing; GO:0008150 biological_process; GO:0045292 mRNA cis splicing, via spliceosome; GO:1903241 U2-type prespliceosome... KEGG KO: K06910, K11090, K12833, K13126 \| Pathway: 03015, 03018, 03040 \| BRITE: 00001, 01002, 03019, 03041	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa01g40290	PaHa01g40290`PaHa01g40290.1`	PaHa01g40290 \| PaHa01g40290.1 \| CYCA3-1 \| 337451.A0A3S3MS32 \| Cyclin_C@131221\|BlR-27 \| Cyclin_C@131567\|HJ-12 \| Cyclin_C@1437183\|DIX-33 \| Cyclin_C@2759\|Ni-14 \| Cyclin_C@33090\|BBU-24 \| Cyclin_N@131221\|Ejx-32 \| Cyclin_N@131567\|CM-9 \| Cyclin_N@1437183\|IKr-37! \|... Show annotation evidence eggNOG Preferred name: CYCA3-1 \| Seed ortholog: 337451.A0A3S3MS32 \| COG: S \| eggNOG OG: Cyclin_C@131221\|BlR-27, Cyclin_C@131567\|HJ-12, Cyclin_C@1437183\|DIX-33, Cyclin_C@2759\|Ni-14, Cyclin_C@33090\|BBU-24, Cyclin_N@131221\|Ejx-32, Cyclin_N@131567\|CM-9, Cyclin_N@1437183\|IKr-37!, Cyclin_N@2759\|APG-21, Cyclin_N@33090\|EEI-31 GO GO:0000070 mitotic sister chromatid segregation; GO:0000082 G1/S transition of mitotic cell cycle; GO:0000086 G2/M transition of mitotic cell cycle; GO:0000278 mitotic cell cycle; GO:0000281 mitotic cytokinesis; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0006275 regulation of DNA replication; GO:0007088 regulation of mitotic nuclear division; GO:0007096... KEGG KO: K06627 \| Pathway: 04110, 04152, 04218, 04914, 05161, 05165, 05166, 05169, 05200, 05202, 05203, 05221 \| BRITE: 00001, 03032, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa01g40360	PaHa01g40360`PaHa01g40360.1`	…3\|C-2! \| S \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0006355 \| GO:0009737 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to abscisic acid Show annotation evidence eggNOG Preferred name: BHLH68 \| Seed ortholog: 337451.A0A443NSA2 \| COG: S \| eggNOG OG: UNK.IA3U@131567\|A-1*, UNK.IA3U@1437183\|C-2! GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009737 response to abscisic acid	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa01g40430	PaHa01g40430`PaHa01g40430.1`	…equence-specific DNA binding \| endothelial cell proliferation \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytosol \| regulation of DNA-templated transcription \| response to water deprivation \| pollen development \| response to abscisic acid \| plant-type seco… Show annotation evidence eggNOG Preferred name: LOC116207915 \| Seed ortholog: 337451.A0A443NSA7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AhB-29, Myb_DNA-binding@3398\|LSn-44, Myb_DNA-binding@58023\|JFj-42 GO GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0001935 endothelial cell proliferation; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa01g40560	PaHa01g40560`PaHa01g40560.1`	… \| DNA-binding transcription repressor activity, RNA polymerase II-specific \| DNA-binding transcription factor activity \| nucleus \| response to water deprivation \| hyperosmotic salinity response Show annotation evidence eggNOG Preferred name: RAP2-1 \| Seed ortholog: 337451.A0A3S3MJY5 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@3193\|wa-21, AP2@33090\|Hw-14 GO GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0042538 hyperosmotic salinity response KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa01g40620	PaHa01g40620`PaHa01g40620.1`	PaHa01g40620 \| PaHa01g40620.1 \| LOC123097877 \| 337451.A0A3S3P2E5 \| PABP@131567\|c-5 \| RRM_1@131567\|PI-17 \| RRM_1@2759\|Alo-24 \| S \| K13126 \| 03015 \| 03018 \| 00001 \| 03019 \| 03041 \| PABP_544_609 \| RRM_1_105_173 \| RRM_1_17_87 \| RRM_1_196_264 \| RRM_1_299_367 \|... Show annotation evidence eggNOG Preferred name: LOC123097877 \| Seed ortholog: 337451.A0A3S3P2E5 \| COG: S \| eggNOG OG: PABP@131567\|c-5, RRM_1@131567\|PI-17, RRM_1@2759\|Alo-24 GO GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening; GO:0000398 mRNA splicing, via spliceosome; GO:0001556 oocyte maturation; GO:0002119 nematode larval development; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0003730 mRNA 3'-UTR binding; GO:0003743 translation initiation factor activity; GO:0005515 protein binding; GO:0006338 chromatin remodeling; GO:0006396 RNA... KEGG KO: K13126 \| Pathway: 03015, 03018 \| BRITE: 00001, 03019, 03041	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa01g40640	PaHa01g40640`PaHa01g40640.1`	PaHa01g40640 \| PaHa01g40640.1 \| AGO5 \| 337451.A0A3S3N5W9 \| ArgoL1@131221\|jP-19 \| ArgoL1@131567\|A-1* \| ArgoL1@2759\|C-2! \| ArgoL1@35493\|MZ-14 \| ArgoL2@131221\|Ii-13 \| ArgoL2@131567\|A-1* \| ArgoL2@2759\|C-2 \| ArgoL2@3193\|LN-14 \| ArgoL2@35493\|Cr-10 \| ArgoMid... Show annotation evidence eggNOG Preferred name: AGO5 \| Seed ortholog: 337451.A0A3S3N5W9 \| COG: S \| eggNOG OG: ArgoL1@131221\|jP-19, ArgoL1@131567\|A-1, ArgoL1@2759\|C-2!, ArgoL1@35493\|MZ-14, ArgoL2@131221\|Ii-13, ArgoL2@131567\|A-1, ArgoL2@2759\|C-2, ArgoL2@3193\|LN-14, ArgoL2@35493\|Cr-10, ArgoMid@131567\|A-1, ArgoMid@2759\|An-8, ArgoMid@3193\|Mc-15, ArgoN@131221\|RT-15, ArgoN@131567\|A-1, ArgoN@2759\|C-2!, ArgoN@3193\|Ws-16, ArgoN@35493\|Dl-11, PAZ@131221... GO GO:0000340 RNA 7-methylguanosine cap binding; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000993 RNA polymerase II complex binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0003676 nucleic acid binding; GO:0003723 RNA binding; GO:0003725 double-stranded RNA binding; GO:0003727 single-stranded RNA... KEGG KO: K11593 \| Pathway: 04320, 04361 \| BRITE: 00001, 03019, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa01g41730	PaHa01g41730`PaHa01g41730.1`	…GO:0048366 \| GO:0048441 \| GO:0048442 \| GO:0048589 \| GO:0048829 \| GO:0051301 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| pattern specification process \| auxin-activated signaling pathway \| abscisic acid-activated signaling pathway \| response to carbohydrate \| fruit devel… Show annotation evidence eggNOG Preferred name: ARF18 \| Seed ortholog: 337451.A0A443NZR4 \| COG: S \| eggNOG OG: Auxin_resp@131221\|AX-8, Auxin_resp@131567\|A-1, Auxin_resp@2759\|O-4, Auxin_resp@3398\|Gd-14, B3@131221\|AHw-20, B3@131567\|A-1, B3@3193\|BOp-25, B3@33090\|Id-12, B3@3398\|CGu-29 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007389 pattern specification process; GO:0009734 auxin-activated signaling pathway; GO:0009738 abscisic acid-activated signaling pathway; GO:0009743 response to carbohydrate; GO:0010154 fruit development; GO:0031540 regulation of anthocyanin biosynthetic process; GO:0035198 miRNA binding; GO:0048366 leaf... KEGG KO: K14486 \| Pathway: 04075 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa01g41900	PaHa01g41900`PaHa01g41900.1`	…d development \| histone H3K27me3 reader activity \| RNA polymerase II-specific DNA-binding transcription factor binding \| terminal button organization \| mitotic spindle \| gene silencing by siRNA-directed DNA methylation \| RNA polymerase II transcription repressor complex \| RNA polymerase II transcrip… Show annotation evidence eggNOG Preferred name: LOC110803654 \| Seed ortholog: 337451.A0A3S3P2J4 \| COG: S \| eggNOG OG: Chromo@131567\|Kq-11, Chromo@1437183\|DVI-31, Chromo@2759\|AGc-19!, PHD@131567\|A-1*, PHD@2759\|Avr-19! GO GO:0000118 histone deacetylase complex; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000724 double-strand break repair via homologous recombination; GO:0000781 chromosome, telomeric region; GO:0000785 chromatin; GO:0000791 euchromatin; GO:0000792 heterochromatin; GO:0000976 transcription cis-regulatory region binding; GO:0001221 transcription coregulator binding; GO:0001709 cell fate... KEGG EC: ec:2.1.1.354, ec:3.1.3.16, ec:5.6.2.6 \| KO: K11643 \| Pathway: 03082 \| BRITE: 00001, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa01g41910	PaHa01g41910`PaHa01g41910.1`	…d development \| histone H3K27me3 reader activity \| RNA polymerase II-specific DNA-binding transcription factor binding \| terminal button organization \| mitotic spindle \| gene silencing by siRNA-directed DNA methylation \| RNA polymerase II transcription repressor complex \| RNA polymerase II transcrip… Show annotation evidence eggNOG Preferred name: LOC110803654 \| Seed ortholog: 337451.A0A3S3P2J4 \| COG: S \| eggNOG OG: Chromo@131567\|Kq-11, Chromo@1437183\|DVI-31, Chromo@2759\|AGc-19!, PHD@131567\|A-1*, PHD@2759\|Avr-19! GO GO:0000118 histone deacetylase complex; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000724 double-strand break repair via homologous recombination; GO:0000781 chromosome, telomeric region; GO:0000785 chromatin; GO:0000791 euchromatin; GO:0000792 heterochromatin; GO:0000976 transcription cis-regulatory region binding; GO:0001221 transcription coregulator binding; GO:0001709 cell fate... KEGG EC: ec:2.1.1.354, ec:3.1.3.16, ec:5.6.2.6 \| KO: K11643 \| Pathway: 03082 \| BRITE: 00001, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa01g42000	PaHa01g42000`PaHa01g42000.1`	…nsed chromosome \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| nucleolus \| cytosol \| regulation of DNA-templated transcription \| negative regulation of cell population proliferation \| asymmetric cell division \| re… Show annotation evidence eggNOG Preferred name: LOC104612238 \| Seed ortholog: 337451.A0A3S3QA31 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@1437183\|KRE-43, Myb_DNA-binding@3193\|GOC-39, Myb_DNA-binding@33090\|Eca-37, Myb_DNA-binding@3398\|HJp-40 GO GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0008356 asymmetric cell division; GO... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa01g42070	PaHa01g42070`PaHa01g42070.1`	PaHa01g42070 \| PaHa01g42070.1 \| TEF-C \| 337451.A0A443NSP1 \| GTP_EFTU@131567\|Ah-10 \| GTP_EFTU_D3@131567\|F-3 \| GTP_EFTU_D3@2759\|p-6 \| S \| K14416 \| 03015 \| 00001 \| 03019 \| GTP_EFTU_338_553 \| GTP_EFTU_D3_666_738 \| GO:0000177 \| GO:0000956 \| GO:0002184 \| GO... Show annotation evidence eggNOG Preferred name: TEF-C \| Seed ortholog: 337451.A0A443NSP1 \| COG: S \| eggNOG OG: GTP_EFTU@131567\|Ah-10, GTP_EFTU_D3@131567\|F-3, GTP_EFTU_D3@2759\|p-6 GO GO:0000177 cytoplasmic exosome (RNase complex); GO:0000956 nuclear-transcribed mRNA catabolic process; GO:0002184 cytoplasmic translational termination; GO:0003747 translation release factor activity; GO:0003924 GTPase activity; GO:0005515 protein binding; GO:0005525 GTP binding; GO:0005575 cellular_component; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006412 translation; GO:0007165 signal transduction; GO... KEGG KO: K14416 \| Pathway: 03015 \| BRITE: 00001, 03019	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g01260	PaHa02g01260`PaHa02g01260.1`	PaHa02g01260 \| PaHa02g01260.1 \| LOC109726622 \| 337451.A0A3S3MDU4 \| eIF2A@131567\|B-2 \| K15026 \| 00001 \| 03012 \| 03019 \| eIF2A_214_415 \| GO:0000049 \| GO:0002183 \| GO:0003674 \| GO:0003729 \| GO:0003743 \| GO:0005515 \| GO:0005575 \| GO:0005576 \| GO:0005737 \| GO... Show annotation evidence eggNOG Preferred name: LOC109726622 \| Seed ortholog: 337451.A0A3S3MDU4 \| eggNOG OG: eIF2A@131567\|B-2 GO GO:0000049 tRNA binding; GO:0002183 cytoplasmic translational initiation; GO:0003674 molecular_function; GO:0003729 mRNA binding; GO:0003743 translation initiation factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005576 extracellular region; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005850 eukaryotic translation initiation factor 2 complex; GO:0006412 translation; GO:0006413... KEGG KO: K15026 \| BRITE: 00001, 03012, 03019	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g01850	PaHa02g01850`PaHa02g01850.1`	…O:0005515 \| GO:0005634 \| GO:0006355 \| GO:0008283 \| GO:1905392 \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| cell population proliferation \| plant organ morphogenesis Show annotation evidence eggNOG Preferred name: BBM2 \| Seed ortholog: 337451.A0A3S3MNL6 \| COG: S \| eggNOG OG: AP2@131567\|Eo-12, AP2@3193\|Apr-24, AP2@33090\|Xs-18, AP2@58023\|EFp-30 GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008283 cell population proliferation; GO:1905392 plant organ morphogenesis KEGG KO: K09285 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g01940	PaHa02g01940`PaHa02g01940.1`	…215 \| GO:1902456 \| GO:1903286 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to light stimulus \| regulation of stomatal movement \| negative regulation of gene expression \| ce… Show annotation evidence eggNOG Preferred name: BHLH128 \| Seed ortholog: 337451.A0A443N0G0 \| COG: S \| eggNOG OG: HLH@131567\|pI-16, HLH@3398\|AbA-19, HLH@58023\|AMn-18 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009416 response to light stimulus; GO:0010119 regulation of stomatal movement; GO:0010629 negative regulation of gene expression; GO:0071215 cellular response to abscisic acid stimulus; GO:1902456... KEGG KO: K06054, K06055, K09087, K09088, K09089, K09090, K09091 \| Pathway: 03460, 04330, 04950, 05165, 05169, 05200, 05224 \| BRITE: 00001, 03000, 03019, 03400	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g02070	PaHa02g02070`PaHa02g02070.1`	… \| transcription cis-regulatory region binding \| defense response to insect \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to water deprivation \| plasmodesma \| response to wounding \| response to bacterium \| response to i… Show annotation evidence eggNOG Preferred name: MYB17 \| Seed ortholog: 337451.A0A443N0L7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|IJS-41, Myb_DNA-binding@33090\|Eca-37 GO GO:0000162 L-tryptophan biosynthetic process; GO:0000976 transcription cis-regulatory region binding; GO:0002213 defense response to insect; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009506 plasmodesma; GO:0009611 response to wounding; GO:0009617 response... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g02080	PaHa02g02080`PaHa02g02080.1`	… \| transcription cis-regulatory region binding \| defense response to insect \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to water deprivation \| plasmodesma \| response to wounding \| response to bacterium \| response to i… Show annotation evidence eggNOG Preferred name: MYB17 \| Seed ortholog: 337451.A0A443N0L7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|IJS-41, Myb_DNA-binding@33090\|Eca-37 GO GO:0000162 L-tryptophan biosynthetic process; GO:0000976 transcription cis-regulatory region binding; GO:0002213 defense response to insect; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009506 plasmodesma; GO:0009611 response to wounding; GO:0009617 response... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g02090	PaHa02g02090`PaHa02g02090.1`	… \| transcription cis-regulatory region binding \| defense response to insect \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to water deprivation \| plasmodesma \| response to wounding \| response to bacterium \| response to i… Show annotation evidence eggNOG Preferred name: MYB17 \| Seed ortholog: 337451.A0A443N0L7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|IJS-41, Myb_DNA-binding@33090\|Eca-37 GO GO:0000162 L-tryptophan biosynthetic process; GO:0000976 transcription cis-regulatory region binding; GO:0002213 defense response to insect; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009506 plasmodesma; GO:0009611 response to wounding; GO:0009617 response... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g02100	PaHa02g02100`PaHa02g02100.1`	… \| transcription cis-regulatory region binding \| defense response to insect \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to water deprivation \| plasmodesma \| response to wounding \| response to bacterium \| response to i… Show annotation evidence eggNOG Preferred name: MYB17 \| Seed ortholog: 337451.A0A443N0L7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|IJS-41, Myb_DNA-binding@33090\|Eca-37 GO GO:0000162 L-tryptophan biosynthetic process; GO:0000976 transcription cis-regulatory region binding; GO:0002213 defense response to insect; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009506 plasmodesma; GO:0009611 response to wounding; GO:0009617 response... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g02110	PaHa02g02110`PaHa02g02110.1`	… \| transcription cis-regulatory region binding \| defense response to insect \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to water deprivation \| plasmodesma \| response to wounding \| response to bacterium \| response to i… Show annotation evidence eggNOG Preferred name: MYB17 \| Seed ortholog: 337451.A0A443N0L7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|IJS-41, Myb_DNA-binding@33090\|Eca-37 GO GO:0000162 L-tryptophan biosynthetic process; GO:0000976 transcription cis-regulatory region binding; GO:0002213 defense response to insect; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009506 plasmodesma; GO:0009611 response to wounding; GO:0009617 response... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g02120	PaHa02g02120`PaHa02g02120.1`	… \| transcription cis-regulatory region binding \| defense response to insect \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to water deprivation \| plasmodesma \| response to wounding \| response to bacterium \| response to i… Show annotation evidence eggNOG Preferred name: MYB17 \| Seed ortholog: 337451.A0A443N0L7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|IJS-41, Myb_DNA-binding@33090\|Eca-37 GO GO:0000162 L-tryptophan biosynthetic process; GO:0000976 transcription cis-regulatory region binding; GO:0002213 defense response to insect; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009506 plasmodesma; GO:0009611 response to wounding; GO:0009617 response... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g02130	PaHa02g02130`PaHa02g02130.1`	… \| transcription cis-regulatory region binding \| defense response to insect \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to water deprivation \| plasmodesma \| response to wounding \| response to bacterium \| response to i… Show annotation evidence eggNOG Preferred name: MYB17 \| Seed ortholog: 337451.A0A443N0L7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|IJS-41, Myb_DNA-binding@33090\|Eca-37 GO GO:0000162 L-tryptophan biosynthetic process; GO:0000976 transcription cis-regulatory region binding; GO:0002213 defense response to insect; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009506 plasmodesma; GO:0009611 response to wounding; GO:0009617 response... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g02140	PaHa02g02140`PaHa02g02140.1`	… \| transcription cis-regulatory region binding \| defense response to insect \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to water deprivation \| plasmodesma \| response to wounding \| response to bacterium \| response to i… Show annotation evidence eggNOG Preferred name: MYB17 \| Seed ortholog: 337451.A0A443N0L7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|IJS-41, Myb_DNA-binding@33090\|Eca-37 GO GO:0000162 L-tryptophan biosynthetic process; GO:0000976 transcription cis-regulatory region binding; GO:0002213 defense response to insect; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009506 plasmodesma; GO:0009611 response to wounding; GO:0009617 response... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g02170	PaHa02g02170`PaHa02g02170.1`	… \| transcription cis-regulatory region binding \| defense response to insect \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to water deprivation \| plasmodesma \| response to wounding \| response to bacterium \| response to i… Show annotation evidence eggNOG Preferred name: MYB17 \| Seed ortholog: 337451.A0A443N0L7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|IJS-41, Myb_DNA-binding@33090\|Eca-37 GO GO:0000162 L-tryptophan biosynthetic process; GO:0000976 transcription cis-regulatory region binding; GO:0002213 defense response to insect; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009506 plasmodesma; GO:0009611 response to wounding; GO:0009617 response... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g02600	PaHa02g02600`PaHa02g02600.1`	PaHa02g02600 \| PaHa02g02600.1 \| LOC104589274 \| 337451.A0A3S3QY21 \| KOW@131567\|BQ-9 \| Spt5-NGN@131567\|A-1 \| Spt5_N@2759\|A-1 \| S \| K15172 \| 03250 \| 00001 \| 03019 \| 03021 \| KOW_577_600 \| Spt5-NGN_174_255 \| Spt5_N_82_168 \| GO:0000122 \| GO:0000245 \| GO:0000993 \|... Show annotation evidence eggNOG Preferred name: LOC104589274 \| Seed ortholog: 337451.A0A3S3QY21 \| COG: S \| eggNOG OG: KOW@131567\|BQ-9, Spt5-NGN@131567\|A-1, Spt5_N@2759\|A-1 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000245 spliceosomal complex assembly; GO:0000993 RNA polymerase II complex binding; GO:0001042 RNA polymerase I core binding; GO:0001179 RNA polymerase I general transcription initiation factor binding; GO:0001764 neuron migration; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003711 transcription elongation factor activity; GO... KEGG KO: K15172 \| Pathway: 03250 \| BRITE: 00001, 03019, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g02650	PaHa02g02650`PaHa02g02650.1`	…634 \| GO:0005737 \| GO:0071243 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| cytoplasm \| cellular response to arsenic-containing substance Show annotation evidence eggNOG Preferred name: LOC104591615 \| Seed ortholog: 337451.A0A3S3M8W9 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@1437183\|Rpy-49, Myb_DNA-binding@3193\|IJM-41, Myb_DNA-binding@33090\|Eca-37 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0071243 cellular response to arsenic-containing substance KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g04040	PaHa02g04040`PaHa02g04040.1`	…O:0010091 \| GO:0031542 \| GO:0090628 \| cell fate specification \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| jasmonic acid mediated signaling pathway \| trichome differentiation \| trichome branching \| positive regula… Show annotation evidence eggNOG Preferred name: GL3 \| Seed ortholog: 337451.A0A3S4N375 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|Jox-34, HLH@33090\|AAF-17, HLH@35493\|Aps-20, bHLH-MYC_N@131567\|A-1*, bHLH-MYC_N@2759\|C-2, bHLH-MYC_N@3193\|Ab-9, bHLH-MYC_N@33090\|r-7, bHLH-MYC_N@3398\|Ci-12 GO GO:0001708 cell fate specification; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009867 jasmonic acid mediated signaling pathway; GO:0010026 trichome differentiation; GO:0010091 trichome branching; GO:0031542 positive regulation of anthocyanin biosynthetic process; GO:0090628...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g04060	PaHa02g04060`PaHa02g04060.1`	…14_262_638 \| GO:0003700 \| GO:0005515 \| GO:0005576 \| GO:0005634 \| GO:0048831 \| DNA-binding transcription factor activity \| protein binding \| extracellular region \| nucleus \| regulation of shoot system development Show annotation evidence eggNOG Preferred name: BAM7 \| Seed ortholog: 337451.A0A443N0Y4 \| COG: S \| eggNOG OG: BES1_N@131567\|A-1*, BES1_N@3398\|T-6, BES1_N@35493\|H-4, Glyco_hydro_14@131567\|AV-8, Glyco_hydro_14@33090\|Cd-12, Glyco_hydro_14@3398\|Op-19 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0048831 regulation of shoot system development KEGG EC: ec:3.2.1.2 \| KO: K01177 \| Pathway: 00500, 01100, 01110 \| BRITE: 00001, 01000 \| CAZy: GH14\|Glycoside Hydrolase Family 14.	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g04100	PaHa02g04100`PaHa02g04100.1`	PaHa02g04100 \| PaHa02g04100.1 \| LOC103705537 \| 337451.A0A3S3PRN1 \| Beta-Casp@131567\|J-4 \| CPSF100_C@2759\|A-1 \| Lactamase_B_6@131567\|F-3 \| RMMBL@131567\|B-2 \| RMMBL@2759\|BF-9 \| S \| K14402 \| 03015 \| 00001 \| 03019 \| Beta-Casp_242_365 \| CPSF100_C_693_782 \|... Show annotation evidence eggNOG Preferred name: LOC103705537 \| Seed ortholog: 337451.A0A3S3PRN1 \| COG: S \| eggNOG OG: Beta-Casp@131567\|J-4, CPSF100_C@2759\|A-1, Lactamase_B_6@131567\|F-3, RMMBL@131567\|B-2, RMMBL@2759\|BF-9 GO GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005847 mRNA cleavage and polyadenylation specificity factor complex; GO:0009506 plasmodesma; GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing KEGG KO: K14402 \| Pathway: 03015 \| BRITE: 00001, 03019	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,418 genes for “transcription factor”

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