Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046
West Indian T2T annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

Matches

2,385 genes for “transcription factor”

Select useful genes and continue directly to GO enrichment or batch sequence export.

Search identifiers instead
0 genes selectedThe selection is stored only in this browser.
GO enrichmentExport FASTA
SelectGeneMatched annotationEvidenceActions
Pa03g1312Pa03g1312.1

…GO:0003700 | GO:0005515 | GO:0005634 | GO:0006355 | GO:0009610 | GO:0009739 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to symbiotic fungus | response to gibberellin

Show annotation evidence
eggNOG
Preferred name: SCL3 | Seed ortholog: 337451.A0A3S3PYU9 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|BM-11, GRAS@3398|FK-14
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009610 response to symbiotic fungus; GO:0009739 response to gibberellin
eggNOGGO
eggNOG-inferred
Pa03g1360Pa03g1360.2

Pa03g1360 | Pa03g1360.2 | Pa03g1360.3 | Pa03g1360.4 | BAD1 | BnaC08g14190D | 337451.A0A3S3N3A3 | 85681.V4S0B8 | Ank_2@131567|B-2 | Ank_2@2706|Ayc-16 | Ank_2@2759|H-4! | Ank_2@3398|Hv-10 | Ank_4@131567|GW-15 | Ank_4@1437183|DFt-27 | PGG@131567|A-1* | PGG...

Show annotation evidence
eggNOG
Preferred name: BAD1, BnaC08g14190D | Seed ortholog: 337451.A0A3S3N3A3, 85681.V4S0B8 | COG: S | eggNOG OG: Ank_2@131567|B-2, Ank_2@2706|Ayc-16, Ank_2@2759|H-4!, Ank_2@3398|Hv-10, Ank_4@131567|GW-15, Ank_4@1437183|DFt-27, PGG@131567|A-1*, PGG@1437201|Vn-16, PGG@2706|AWc-23, PGG@3193|Aa-7, PGG@33090|Z-5, PGG@33090|a-5, PGG@3398|JG-12
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000724 double-strand break repair via homologous recombination; GO:0001554 luteolysis; GO:0001568 blood vessel development; GO:0001701 in utero embryonic development; GO:0001708 cell fate specification; GO:0001709 cell fate determination; GO:0001745 compound eye morphogenesis; GO:0001756 somitogenesis; GO:0001822...
KEGG
EC: ec:2.7.10.2 | KO: K02599, K05293, K06867, K09257, K10683, K12491, K15009, K17266, K17512, K17540, K17554, K17566, K17848, K19626, K20129, K20456, K20994, K20995, K20996, K21411, K21413, K21414, K21415, K21435, K21436, K21437, K21441, K21596, K21878, K21952, K25576 | Pathway: 00563, 01100, 01522, 03440, 04013, 04068, 04144, 04320, 04330, 04361, 04371, 04658, 04724, 04919, 05020, 05165, 05200, 05206, 05207,...
eggNOGGOKEGG
eggNOG-inferred
Pa03g1364Pa03g1364.1

Pa03g1364 | Pa03g1364.1 | Pa03g1364.2 | BAD1 | 337451.A0A3S3N3A3 | 337451.A0A443NGP7 | Ank@131567|AAR-20 | Ank@2759|AYf-22 | Ank_2@131567|B-2 | Ank_2@2759|H-4! | PGG@131567|A-1* | PGG@33090|Z-5 | S | ec:2.3.2.27 | ec:2.7.10.2 | K21435 | 00563 | 01100 |...

Show annotation evidence
eggNOG
Preferred name: BAD1 | Seed ortholog: 337451.A0A3S3N3A3, 337451.A0A443NGP7 | COG: S | eggNOG OG: Ank@131567|AAR-20, Ank@2759|AYf-22, Ank_2@131567|B-2, Ank_2@2759|H-4!, PGG@131567|A-1*, PGG@33090|Z-5
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000724 double-strand break repair via homologous recombination; GO:0001554 luteolysis; GO:0001568 blood vessel development; GO:0001701 in utero embryonic development; GO:0001708 cell fate specification; GO:0001709 cell fate determination; GO:0001745 compound eye morphogenesis; GO:0001756 somitogenesis; GO:0001822...
KEGG
EC: ec:2.3.2.27, ec:2.7.10.2 | KO: K21435 | Pathway: 00563, 01100, 01522, 03440, 04013, 04068, 04144, 04320, 04330, 04361, 04371, 04658, 04724, 04919, 05020, 05165, 05200, 05206, 05207, 05224, 05417 | BRITE: 00001, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa03g1514Pa03g1514.1

…scription cis-regulatory region binding | response to hypoxia | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | plasma membrane | response to fungus | regulation of gene expression | detection of hypoxia | regulation of root development

Show annotation evidence
eggNOG
Preferred name: LOC109726863 | Seed ortholog: 337451.A0A3S3NB81 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@3193|KI-15, AP2@33090|Hp-14, AP2@3398|je-20, AP2@58023|Vz-18
GO
GO:0000976 transcription cis-regulatory region binding; GO:0001666 response to hypoxia; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005886 plasma membrane; GO:0009620 response to fungus; GO:0010468 regulation of gene expression; GO:0070483 detection of hypoxia; GO:2000280 regulation of root development
KEGG
KO: K09286 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g1529Pa03g1529.1

… | transcription cis-regulatory region binding | defense response to insect | DNA-binding transcription factor activity | nucleus | response to wounding | phloem or xylem histogenesis | cell division

Show annotation evidence
eggNOG
Preferred name: LOC104609294 | Seed ortholog: 337451.A0A443NCF7 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@3193|dv-19, AP2@33090|Hw-14
GO
GO:0000976 transcription cis-regulatory region binding; GO:0002213 defense response to insect; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009611 response to wounding; GO:0010087 phloem or xylem histogenesis; GO:0051301 cell division
KEGG
KO: K09286 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g1530Pa03g1530.1

… | transcription cis-regulatory region binding | defense response to insect | DNA-binding transcription factor activity | nucleus | response to wounding | phloem or xylem histogenesis | cell division

Show annotation evidence
eggNOG
Preferred name: LOC104609294 | Seed ortholog: 337451.A0A443NCF7 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@3193|dv-19, AP2@33090|Hw-14
GO
GO:0000976 transcription cis-regulatory region binding; GO:0002213 defense response to insect; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009611 response to wounding; GO:0010087 phloem or xylem histogenesis; GO:0051301 cell division
KEGG
KO: K09286 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g1724Pa03g1724.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: LOC104592198 | Seed ortholog: 337451.A0A3S3N7X7 | COG: COG5635 | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@3398|Dli-32, NB-ARC@35493|Ary-24, NB-ARC@58023|BfR-27
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K13457 | Pathway: 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa03g1764Pa03g1764.1

…65 | GO:0045892 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to water deprivation | response to abscisic acid | ethylene-activated signaling pathway | negativ…

Show annotation evidence
eggNOG
Preferred name: ERF3 | Seed ortholog: 337451.A0A3S3NBC3 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@1437183|Dns-30, AP2@33090|ATg-23
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009737 response to abscisic acid; GO:0009873 ethylene-activated signaling pathway; GO:0010105 negative regulation of ethylene-activated...
KEGG
KO: K09286 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g1790Pa03g1790.1

…GO:0042803 | GO:0043565 | GO:0045892 | GO:0046982 | GO:0048481 | GO:1903288 | DNA-binding transcription factor activity | protein binding | nucleus | negative regulation of cell population proliferation | response to abscisic acid | fruit ripening | fruit ripening, climacteric | positive regulation …

Show annotation evidence
eggNOG
Preferred name: ARF2, LOC113461213 | Seed ortholog: 337451.A0A3S3N668, 337451.A0A443N3M7 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|qd-19, AUX_IAA@3398|Auy-26, Auxin_resp@131567|A-1*, Auxin_resp@2759|N-4, Auxin_resp@3398|CF-11, DUF659@131567|A-1*, DUF659@2759|Iw-13, DUF659@3193|ZP-17, DUF659@3398|eG-18, Dimer_Tnp_hAT@131567|B-2, Dimer_Tnp_hAT@33090|Ii-12, Dimer_Tnp_hAT@3398|ALj-18,...
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008285 negative regulation of cell population proliferation; GO:0009737 response to abscisic acid; GO:0009835 fruit ripening; GO:0009836 fruit ripening, climacteric; GO:0009911 positive regulation of flower development; GO:0010047 fruit dehiscence; GO:0010150 leaf senescence; GO:0010227 floral organ abscission...
KEGG
EC: ec:3.4.22.68 | KO: K08592, K14486 | Pathway: 04075 | BRITE: 00001, 01000, 01002, 04121
eggNOGGOKEGG
eggNOG-inferred
Pa03g1800Pa03g1800.1

…-specific DNA binding | DNA-templated transcription open complex formation | TFIIIC-class transcription factor complex binding | molecular_function | DNA binding | RNA binding | mRNA binding | cytidine deaminase activity | endonuclease activity | protein binding | nucleus | regulation of DNA-templat…

Show annotation evidence
eggNOG
Preferred name: LOC108983431, PCMP-H53 | Seed ortholog: 337451.A0A3S3MWR4, 337451.A0A443NCS0 | COG: S | eggNOG OG: E_motif@131567|A-1*, E_motif@1437183|Vx-12, E_motif@2759|Eq-9, E_motif@58023|Ny-11, Myb_DNA-bind_7@2759|A-1, PPR@131567|Fd-11, PPR@1437183|Sim-38, PPR@58023|Qrl-36, PPR_2@131221|Hjh-32, PPR_2@131567|DQ-11, PPR_2@1437183|OJc-38, PPR_2@3193|Ina-33, PPR_2@3398|NEp-37, PPR_2@58023|MAQ-36
GO
GO:0000963 mitochondrial RNA processing; GO:0000995 RNA polymerase III general transcription initiation factor activity; GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding; GO:0001112 DNA-templated transcription open complex formation; GO:0001156 TFIIIC-class transcription factor complex binding; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003723 RNA binding; GO:0003729 mRNA...
KEGG
EC: ec:2.7.7.6, ec:3.2.1.14, ec:3.5.1.49, ec:5.2.1.8, ec:5.6.2.4 | KO: K01183, K01455, K03457, K10683, K10908, K15198, K15271 | Pathway: 00460, 00520, 00630, 00910, 01100, 01200, 03440 | BRITE: 00001, 01000, 03019, 03021, 03029, 03036, 03400, 04121 | CAZy: GT77|Glycosyltransferase Family 77.
eggNOGGOKEGG
eggNOG-inferred
Pa03g1845Pa03g1845.1

Pa03g1845 | Pa03g1845.1 | R1A-6_16 | 337451.A0A443N7B7 | zf-CCHC@131567|Em-12 | zf-CCHC@2759|np-19 | zf-GRF@131567|a-5 | S | ec:3.1.11.2 | ec:3.1.4.1 | ec:4.2.99.18 | ec:5.6.2.1 | ec:5.6.2.3 | ec:5.6.2.5 | ec:7.2.2.8 | K01142 | K03165 | K09276 | K10569 |...

Show annotation evidence
eggNOG
Preferred name: R1A-6_16 | Seed ortholog: 337451.A0A443N7B7 | COG: S | eggNOG OG: zf-CCHC@131567|Em-12, zf-CCHC@2759|np-19, zf-GRF@131567|a-5
GO
GO:0000012 single strand break repair; GO:0000278 mitotic cell cycle; GO:0000405 bubble DNA binding; GO:0000712 resolution of meiotic recombination intermediates; GO:0000724 double-strand break repair via homologous recombination; GO:0000725 recombinational repair; GO:0001650 fibrillar center; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003684 damaged DNA binding; GO:0003690 double-stranded DNA...
KEGG
EC: ec:3.1.11.2, ec:3.1.4.1, ec:4.2.99.18, ec:5.6.2.1, ec:5.6.2.3, ec:5.6.2.5, ec:7.2.2.8 | KO: K01142, K03165, K09276, K10569, K10706, K10772, K11292, K13187, K14440, K15173, K15363, K17491, K17686, K18417, K25177 | Pathway: 03410, 03440, 03460, 04918 | BRITE: 00001, 01000, 01009, 03000, 03009, 03019, 03021, 03032, 03036, 03041, 03400
eggNOGGOKEGG
eggNOG-inferred
Pa03g1848Pa03g1848.1

…GO:0005515 | GO:0005634 | GO:0009554 | GO:0009908 | GO:0030163 | GO:0046622 | DNA-binding transcription factor activity | protein binding | nucleus | megasporogenesis | flower development | protein catabolic process | positive regulation of organ growth

Show annotation evidence
eggNOG
Preferred name: SAP | Seed ortholog: 337451.A0A3S3NW50 | COG: S | eggNOG OG: UNK.92RE@58023|A-1
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009554 megasporogenesis; GO:0009908 flower development; GO:0030163 protein catabolic process; GO:0046622 positive regulation of organ growth
eggNOGGO
eggNOG-inferred
Pa03g1849Pa03g1849.1

…GO:0005515 | GO:0005634 | GO:0009554 | GO:0009908 | GO:0030163 | GO:0046622 | DNA-binding transcription factor activity | protein binding | nucleus | megasporogenesis | flower development | protein catabolic process | positive regulation of organ growth

Show annotation evidence
eggNOG
Preferred name: SAP | Seed ortholog: 337451.A0A3S3NW50 | COG: S | eggNOG OG: UNK.92RE@58023|A-1
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009554 megasporogenesis; GO:0009908 flower development; GO:0030163 protein catabolic process; GO:0046622 positive regulation of organ growth
eggNOGGO
eggNOG-inferred
Pa03g1862Pa03g1862.1

…18 | GO:0010218 | GO:0042753 | GO:0045893 | GO:1900056 | molecular_function | DNA-binding transcription factor activity | protein binding | cellular_component | nucleus | biological_process | plasmodesma | response to red or far red light | red or far-red light signaling pathway | far-red light sign…

Show annotation evidence
eggNOG
Preferred name: ZSWIM3 | Seed ortholog: 337451.A0A443NCY9 | COG: COG4715 | eggNOG OG: SWIM@131567|Z-5
GO
GO:0003674 molecular_function; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0008150 biological_process; GO:0009506 plasmodesma; GO:0009639 response to red or far red light; GO:0010017 red or far-red light signaling pathway; GO:0010018 far-red light signaling pathway; GO:0010218 response to far red light; GO:0042753 positive...
KEGG
EC: ec:3.4.16.5 | KO: K13289, K17604, K26145 | Pathway: 04142 | BRITE: 00001, 01000, 01002, 01009, 03110, 04131, 04147, 04990
eggNOGGOKEGG
eggNOG-inferred
Pa03g1866Pa03g1866.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

Show annotation evidence
eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A3S3MAU8 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa03g1867Pa03g1867.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

Show annotation evidence
eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A3S3MAU8 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa03g1868Pa03g1868.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

Show annotation evidence
eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A3S3MAU8 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa03g1869Pa03g1869.1

…Wnt signaling pathway | regulation protein catabolic process at postsynapse | DNA-binding transcription factor binding | chromatin-protein adaptor activity | co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway | regulation of protein localization to nucleus | regulation o…

Show annotation evidence
eggNOG
Preferred name: RH40 | Seed ortholog: 337451.A0A443NCW9 | COG: S | eggNOG OG: DEAD@131567|Fpr-34, DEAD@2759|PnE-44, DEAD@3193|rzO-55, Helicase_C|VOIY5N@2759, WW@131567|TR-14
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000325 plant-type vacuole; GO:0000413 protein peptidyl-prolyl isomerization; GO:0000993 RNA polymerase II complex binding; GO:0001666 response to hypoxia; GO:0001934 positive regulation of protein phosphorylation; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0003724 RNA helicase activity; GO:0003729 mRNA binding; GO:0003755...
KEGG
EC: ec:5.6.2.7 | KO: K12823 | Pathway: 03040 | BRITE: 00001, 01000, 03009, 03041
eggNOGGOKEGG
eggNOG-inferred
Pa03g1901Pa03g1901.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

Show annotation evidence
eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A3S3MAU8 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa03g1902Pa03g1902.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

Show annotation evidence
eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A443NCY5 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa03g1903Pa03g1903.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

Show annotation evidence
eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A3S3MAU8 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa03g1913Pa03g1913.1

…484 | GO:0120195 | GO:1902074 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to fungus | response to abscisic acid | programmed cell death | regulation of RNA splicing | posi…

Show annotation evidence
eggNOG
Preferred name: MYB108 | Seed ortholog: 337451.A0A3S3MWX4 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3398|KPD-43, Myb_DNA-binding@35493|EcV-37
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009620 response to fungus; GO:0009737 response to abscisic acid; GO:0012501 programmed cell death; GO:0043484 regulation of RNA splicing; GO:0120195 positive regulation of anther dehiscence; GO:1902074...
KEGG
EC: ec:1.17.99.9 | KO: K09422 | Pathway: 00190, 00860, 01100, 01110, 01240, 04626 | Module: M00154 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g1940Pa03g1940.1

…742 | GO:0042542 | GO:0043565 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to oxidative stress | response to salt stress | brassinosteroid mediated signaling pathway | resp…

Show annotation evidence
eggNOG
Preferred name: BHLH148 | Seed ortholog: 337451.A0A443ND14 | COG: S | eggNOG OG: UNK.FBJB@131567|A-1*, UNK.FBJB@3398|d-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006979 response to oxidative stress; GO:0009651 response to salt stress; GO:0009742 brassinosteroid mediated signaling pathway; GO:0042542 response to hydrogen peroxide; GO:0043565 sequence-specific...
eggNOGGO
eggNOG-inferred
Pa03g1941Pa03g1941.1

…742 | GO:0042542 | GO:0043565 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to oxidative stress | response to salt stress | brassinosteroid mediated signaling pathway | resp…

Show annotation evidence
eggNOG
Preferred name: BHLH148 | Seed ortholog: 337451.A0A443ND14 | COG: S | eggNOG OG: UNK.FBJB@131567|A-1*, UNK.FBJB@3398|d-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006979 response to oxidative stress; GO:0009651 response to salt stress; GO:0009742 brassinosteroid mediated signaling pathway; GO:0042542 response to hydrogen peroxide; GO:0043565 sequence-specific...
eggNOGGO
eggNOG-inferred
Pa03g1981Pa03g1981.1

…GO:0006971 | GO:0009267 | GO:0043565 | GO:0045893 | GO:0046982 | GO:2000693 | DNA-binding transcription factor activity | protein binding | nucleus | hypotonic response | cellular response to starvation | sequence-specific DNA binding | positive regulation of DNA-templated transcription | protein he…

Show annotation evidence
eggNOG
Preferred name: OBF1 | Seed ortholog: 337451.A0A3S4NFA4 | COG: S | eggNOG OG: bZIP_1@131567|iz-20, bZIP_1@33090|Buj-30, bZIP_1@3398|CPH-31
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006971 hypotonic response; GO:0009267 cellular response to starvation; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0046982 protein heterodimerization activity; GO:2000693 positive regulation of seed maturation
KEGG
KO: K25786 | Pathway: 04022, 04024, 04148, 04151, 04152, 04211, 04261, 04380, 04612, 04668, 04710, 04713, 04714, 04725, 04728, 04911, 04915, 04916, 04918, 04922, 04924, 04925, 04926, 04927, 04928, 04931, 04934, 04935, 04962, 05016, 05020, 05030, 05031, 05034, 05152, 05161, 05163, 05165, 05166, 05167, 05202, 05203, 05207, 05215 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g1990Pa03g1990.1

…555 | GO:1900386 | GO:1990841 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | negative regulation of cell population proliferation | response to light stimulus | response to salt stress | response to ethylene | response to auxin…

Show annotation evidence
eggNOG
Preferred name: MYB12 | Seed ortholog: 337451.A0A443ND81 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|DqE-36, Myb_DNA-binding@35493|FSr-38, Myb_DNA-binding@58023|HJu-40!
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008285 negative regulation of cell population proliferation; GO:0009416 response to light stimulus; GO:0009651 response to salt stress; GO:0009723 response to ethylene; GO:0009733 response to auxin; GO:0009813 flavonoid biosynthetic process; GO:0010224...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g1999Pa03g1999.1

…y response regulator activity | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | cytosol | response to water deprivation | chloroplast | response to ethylene | response to cytokinin | cytokinin-activated signaling pathw…

Show annotation evidence
eggNOG
Preferred name: LOC120105689 | Seed ortholog: 337451.A0A3S4NFB8 | COG: S | eggNOG OG: Myb_DNA-binding@131567|Se-18, Myb_DNA-binding@1437183|DKy-35, Myb_DNA-binding@33090|Bhq-32, Response_reg|AT38GL@131567, Response_reg|AT38GL@2759, Response_reg|AT38GL@33090, Response_reg|AT38GL@3398
GO
GO:0000156 phosphorelay response regulator activity; GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0009414 response to water deprivation; GO:0009507 chloroplast; GO:0009723 response to ethylene; GO:0009735 response to cytokinin; GO:0009736 cytokinin-activated...
KEGG
KO: K14491 | Pathway: 04075 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa03g2103Pa03g2103.1

…ing | RNA polymerase II cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity, RNA polymerase II-specific | DNA-binding transcription repressor activity | DNA-binding transcription activator activity, RNA polymerase II-specific | DNA binding | chromatin bind…

Show annotation evidence
eggNOG
Preferred name: LOC104599016 | Seed ortholog: 337451.A0A3S3MMU1 | COG: COG2036 | eggNOG OG: CBFD_NFYB_HMF@131567|BS-10, CBFD_NFYB_HMF@2759|GM-15, CBFD_NFYB_HMF@3398|BqF-32
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001217 DNA-binding transcription repressor activity; GO:0001228 DNA-binding transcription activator...
KEGG
EC: ec:6.5.1.3 | KO: K08065 | Pathway: 04612, 05152, 05166 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g2251Pa03g2251.1

Pa03g2251 | Pa03g2251.1 | LOC110796628 | 337451.A0A443N5V4 | Ank_2@131567|BN-7 | Ank_2@2759|hc-12 | PGG@131567|A-1* | PGG@3193|DB-9 | PGG@33090|a-5 | PGG@3398|kI-19 | S | K04971 | K04972 | K04973 | K04974 | K04975 | K04984 | K05222 | K15503 | 04080 | 04218 ...

Show annotation evidence
eggNOG
Preferred name: LOC110796628 | Seed ortholog: 337451.A0A443N5V4 | COG: S | eggNOG OG: Ank_2@131567|BN-7, Ank_2@2759|hc-12, PGG@131567|A-1*, PGG@3193|DB-9, PGG@33090|a-5, PGG@3398|kI-19
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001659 temperature homeostasis; GO:0001660 fever generation; GO:0001774 microglial cell activation; GO:0001964 startle response; GO:0002024 diet induced thermogenesis; GO:0002790 peptide secretion; GO:0003085 negative regulation of systemic arterial blood pressure; GO:0003674 molecular_function; GO:0004888 transmembrane signaling receptor...
KEGG
KO: K04971, K04972, K04973, K04974, K04975, K04984, K05222, K15503 | Pathway: 04080, 04218, 04621, 04750, 04928, 04961, 04970, 04978, 05418 | BRITE: 00001, 01009, 03400, 04040
eggNOGGOKEGG
eggNOG-inferred
Pa03g2305Pa03g2305.1

…634 | GO:0010374 | GO:0090627 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | stomatal complex development | plant epidermal cell differentiation

Show annotation evidence
eggNOG
Preferred name: MUTE | Seed ortholog: 337451.A0A3S3MXB2 | eggNOG OG: HLH@131567|OW-12, HLH@3193|pN-16, HLH@3398|AAL-17, HLH@35493|gX-15
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010374 stomatal complex development; GO:0090627 plant epidermal cell differentiation
KEGG
KO: K09092, K22495 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred

Pages