Feature identity
- Identifier
- PaHa03g08620.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 600 bp
- Genomic location
- 3:16,947,277–16,947,931
- Strand
- +
Hass · mRNA
PaHa03g08620.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 600
- bp
- 3:16,947,277–16,947,931
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g08620
- eggNOG
- Preferred name: LOC104591903 | Seed ortholog: 337451.A0A3S3N9H0 | COG: COG0513 | eggNOG OG: DEAD@131567|Fps-34!, DEAD@1437183|fDF-51
- Gene Ontology
- GO:0000398 mRNA splicing, via spliceosome; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0035196 miRNA processing; GO:0140223 general transcription initiation factor activity
- KEGG
- EC: ec:5.6.2.7 | KO: K12858 | Pathway: 03040 | BRITE: 00001, 01000, 03041
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g08620.1-protein
derives_frommRNAPaHa03g08620.1
mRNAPaHa03g08620.1
part_ofgenePaHa03g08620
CDS
part_ofPaHa03g08620.1-CDS-3-1787993825:16947277..16947480mRNAPaHa03g08620.1
CDS
part_ofPaHa03g08620.1-CDS-3-1787993825:16947536..16947931mRNAPaHa03g08620.1
exon
part_ofPaHa03g08620.1-exon-3-1787993825:16947277..16947480mRNAPaHa03g08620.1
exon
part_ofPaHa03g08620.1-exon-3-1787993825:16947536..16947931mRNAPaHa03g08620.1
