Feature identity
- Identifier
- PaHa01g09460.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 627 bp
- Genomic location
- 1:13,910,039–13,913,664
- Strand
- +
Hass · mRNA
PaHa01g09460.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 627
- bp
- 1:13,910,039–13,913,664
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g09460
- eggNOG
- Preferred name: LOC100822070 | Seed ortholog: 337451.A0A3S5WGF5 | COG: S | eggNOG OG: zf-B_box@2759|B-2!, zf-B_box@33090|m-7, zf-B_box@3398|HE-14
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009640 photomorphogenesis; GO:0010100 negative regulation of photomorphogenesis; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0070370 cellular heat acclimation; GO:0071483 cellular response to blue light
- KEGG
- KO: K12135 | Pathway: 04712 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g09460.1-protein
derives_frommRNAPaHa01g09460.1
mRNAPaHa01g09460.1
part_ofgenePaHa01g09460
CDS
part_ofPaHa01g09460.1-CDS-1-1787993825:13910039..13910131mRNAPaHa01g09460.1
CDS
part_ofPaHa01g09460.1-CDS-1-1787993825:13912357..13912453mRNAPaHa01g09460.1
CDS
part_ofPaHa01g09460.1-CDS-1-1787993825:13912585..13912700mRNAPaHa01g09460.1
CDS
part_ofPaHa01g09460.1-CDS-1-1787993825:13912791..13913027mRNAPaHa01g09460.1
CDS
part_ofPaHa01g09460.1-CDS-1-1787993825:13913581..13913664mRNAPaHa01g09460.1
exon
part_ofPaHa01g09460.1-exon-1-1787993825:13910039..13910131mRNAPaHa01g09460.1
exon
part_ofPaHa01g09460.1-exon-1-1787993825:13912357..13912453mRNAPaHa01g09460.1
exon
part_ofPaHa01g09460.1-exon-1-1787993825:13912585..13912700mRNAPaHa01g09460.1
exon
part_ofPaHa01g09460.1-exon-1-1787993825:13912791..13913027mRNAPaHa01g09460.1
exon
part_ofPaHa01g09460.1-exon-1-1787993825:13913581..13913664mRNAPaHa01g09460.1
