Feature identity
- Identifier
- PaHa03g18220.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 813 bp
- Genomic location
- 3:57,260,736–57,264,659
- Strand
- −
Hass · mRNA
PaHa03g18220.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 813
- bp
- 3:57,260,736–57,264,659
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g18220
- eggNOG
- Preferred name: BHLH148 | Seed ortholog: 337451.A0A443ND14 | COG: S | eggNOG OG: UNK.FBJB@131567|A-1*, UNK.FBJB@3398|d-6
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006979 response to oxidative stress; GO:0009651 response to salt stress; GO:0009742 brassinosteroid mediated signaling pathway; GO:0042542 response to hydrogen peroxide; GO:0043565 sequence-specific DNA binding
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g18220.1-protein
derives_frommRNAPaHa03g18220.1
mRNAPaHa03g18220.1
part_ofgenePaHa03g18220
CDS
part_ofPaHa03g18220.1-CDS-3-1787993825:57260736..57260834mRNAPaHa03g18220.1
CDS
part_ofPaHa03g18220.1-CDS-3-1787993825:57262154..57262236mRNAPaHa03g18220.1
CDS
part_ofPaHa03g18220.1-CDS-3-1787993825:57262350..57262817mRNAPaHa03g18220.1
CDS
part_ofPaHa03g18220.1-CDS-3-1787993825:57262934..57262975mRNAPaHa03g18220.1
CDS
part_ofPaHa03g18220.1-CDS-3-1787993825:57264539..57264659mRNAPaHa03g18220.1
exon
part_ofPaHa03g18220.1-exon-3-1787993825:57260736..57260834mRNAPaHa03g18220.1
exon
part_ofPaHa03g18220.1-exon-3-1787993825:57262154..57262236mRNAPaHa03g18220.1
exon
part_ofPaHa03g18220.1-exon-3-1787993825:57262350..57262817mRNAPaHa03g18220.1
exon
part_ofPaHa03g18220.1-exon-3-1787993825:57262934..57262975mRNAPaHa03g18220.1
exon
part_ofPaHa03g18220.1-exon-3-1787993825:57264539..57264659mRNAPaHa03g18220.1
