Feature identity
- Identifier
- PaHa03g21770.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,127 bp
- Genomic location
- 3:64,741,980–64,757,307
- Strand
- −
Hass · mRNA
PaHa03g21770.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,127
- bp
- 3:64,741,980–64,757,307
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g21770
- eggNOG
- Preferred name: BHLH | Seed ortholog: 337451.A0A3S3NWQ0 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|GTL-31!, HLH@33090|AAF-17, HLH@35493|Aps-20, bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|C-2, bHLH-MYC_N@3193|Ac-9, bHLH-MYC_N@33090|r-7
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009867 jasmonic acid mediated signaling pathway; GO:0009962 regulation of flavonoid biosynthetic process; GO:0010026 trichome differentiation; GO:0010214 seed coat development; GO:0031542 positive regulation of anthocyanin biosynthetic process; GO:0045893 positive regulation of DNA-templated transcription; GO:0048316 seed development; GO:2000029 regulation of proanthocyanidin biosynthetic process
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g21770.1-protein
derives_frommRNAPaHa03g21770.1
mRNAPaHa03g21770.1
part_ofgenePaHa03g21770
CDS
part_ofPaHa03g21770.1-CDS-3-1787993825:64741980..64742072mRNAPaHa03g21770.1
CDS
part_ofPaHa03g21770.1-CDS-3-1787993825:64742252..64742731mRNAPaHa03g21770.1
CDS
part_ofPaHa03g21770.1-CDS-3-1787993825:64743022..64743461mRNAPaHa03g21770.1
CDS
part_ofPaHa03g21770.1-CDS-3-1787993825:64744427..64744991mRNAPaHa03g21770.1
CDS
part_ofPaHa03g21770.1-CDS-3-1787993825:64745599..64745655mRNAPaHa03g21770.1
CDS
part_ofPaHa03g21770.1-CDS-3-1787993825:64745751..64745765mRNAPaHa03g21770.1
CDS
part_ofPaHa03g21770.1-CDS-3-1787993825:64747124..64747220mRNAPaHa03g21770.1
CDS
part_ofPaHa03g21770.1-CDS-3-1787993825:64755536..64755790mRNAPaHa03g21770.1
CDS
part_ofPaHa03g21770.1-CDS-3-1787993825:64757183..64757307mRNAPaHa03g21770.1
exon
part_ofPaHa03g21770.1-exon-3-1787993825:64741980..64742072mRNAPaHa03g21770.1
exon
part_ofPaHa03g21770.1-exon-3-1787993825:64742252..64742731mRNAPaHa03g21770.1
exon
part_ofPaHa03g21770.1-exon-3-1787993825:64743022..64743461mRNAPaHa03g21770.1
exon
part_ofPaHa03g21770.1-exon-3-1787993825:64744427..64744991mRNAPaHa03g21770.1
exon
part_ofPaHa03g21770.1-exon-3-1787993825:64745599..64745655mRNAPaHa03g21770.1
exon
part_ofPaHa03g21770.1-exon-3-1787993825:64745751..64745765mRNAPaHa03g21770.1
exon
part_ofPaHa03g21770.1-exon-3-1787993825:64747124..64747220mRNAPaHa03g21770.1
exon
part_ofPaHa03g21770.1-exon-3-1787993825:64755536..64755790mRNAPaHa03g21770.1
exon
part_ofPaHa03g21770.1-exon-3-1787993825:64757183..64757307mRNAPaHa03g21770.1
