Feature identity
- Identifier
- PaHa03g22030.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,338 bp
- Genomic location
- 3:65,439,969–65,443,159
- Strand
- +
Hass · mRNA
PaHa03g22030.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,338
- bp
- 3:65,439,969–65,443,159
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g22030
- eggNOG
- Preferred name: LOC103719229 | Seed ortholog: 337451.A0A3S3Q141 | COG: COG0568 | eggNOG OG: Sigma70_r2@131567|AQM-18!, Sigma70_r2@3398|LAa-28, Sigma70_r3@131567|C-2!, Sigma70_r3@58023|DC-9, Sigma70_r4@131567|Bnn-30
- Gene Ontology
- GO:0006352 DNA-templated transcription initiation; GO:0009507 chloroplast; GO:0016987 sigma factor activity; GO:0071482 cellular response to light stimulus; GO:2001141 regulation of RNA biosynthetic process
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g22030.1-protein
derives_frommRNAPaHa03g22030.1
mRNAPaHa03g22030.1
part_ofgenePaHa03g22030
CDS
part_ofPaHa03g22030.1-CDS-3-1787993825:65439969..65440454mRNAPaHa03g22030.1
CDS
part_ofPaHa03g22030.1-CDS-3-1787993825:65441056..65441427mRNAPaHa03g22030.1
CDS
part_ofPaHa03g22030.1-CDS-3-1787993825:65441537..65441737mRNAPaHa03g22030.1
CDS
part_ofPaHa03g22030.1-CDS-3-1787993825:65442881..65443159mRNAPaHa03g22030.1
exon
part_ofPaHa03g22030.1-exon-3-1787993825:65439969..65440454mRNAPaHa03g22030.1
exon
part_ofPaHa03g22030.1-exon-3-1787993825:65441056..65441427mRNAPaHa03g22030.1
exon
part_ofPaHa03g22030.1-exon-3-1787993825:65441537..65441737mRNAPaHa03g22030.1
exon
part_ofPaHa03g22030.1-exon-3-1787993825:65442881..65443159mRNAPaHa03g22030.1
