Feature identity
- Identifier
- PaHa03g22970.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,316 bp
- Genomic location
- 3:66,733,724–66,749,761
- Strand
- −
Hass · mRNA
PaHa03g22970.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,316
- bp
- 3:66,733,724–66,749,761
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g22970
- eggNOG
- Preferred name: MYB3R3 | Seed ortholog: 337451.A0A3S3MN87 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AWj-28, Myb_DNA-binding@2759|AhA-29
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006974 DNA damage response; GO:0008285 negative regulation of cell population proliferation; GO:0009409 response to cold; GO:0009723 response to ethylene; GO:0009733 response to auxin; GO:0009751 response to salicylic acid; GO:0009753 response to jasmonic acid; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:0070176 DRM complex; GO:1901002 positive regulation of response to salt stress; GO:1902584 positive regulation of response to water deprivation
- KEGG
- KO: K09422 | Pathway: 04151, 04218 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g22970.1-protein
derives_frommRNAPaHa03g22970.1
mRNAPaHa03g22970.1
part_ofgenePaHa03g22970
CDS
part_ofPaHa03g22970.1-CDS-3-1787993825:66733724..66734822mRNAPaHa03g22970.1
CDS
part_ofPaHa03g22970.1-CDS-3-1787993825:66736200..66736328mRNAPaHa03g22970.1
CDS
part_ofPaHa03g22970.1-CDS-3-1787993825:66738918..66739021mRNAPaHa03g22970.1
CDS
part_ofPaHa03g22970.1-CDS-3-1787993825:66739125..66739219mRNAPaHa03g22970.1
CDS
part_ofPaHa03g22970.1-CDS-3-1787993825:66740028..66740085mRNAPaHa03g22970.1
CDS
part_ofPaHa03g22970.1-CDS-3-1787993825:66740531..66740582mRNAPaHa03g22970.1
CDS
part_ofPaHa03g22970.1-CDS-3-1787993825:66744090..66744247mRNAPaHa03g22970.1
CDS
part_ofPaHa03g22970.1-CDS-3-1787993825:66744662..66744904mRNAPaHa03g22970.1
CDS
part_ofPaHa03g22970.1-CDS-3-1787993825:66749384..66749761mRNAPaHa03g22970.1
exon
part_ofPaHa03g22970.1-exon-3-1787993825:66733724..66734822mRNAPaHa03g22970.1
exon
part_ofPaHa03g22970.1-exon-3-1787993825:66736200..66736328mRNAPaHa03g22970.1
exon
part_ofPaHa03g22970.1-exon-3-1787993825:66738918..66739021mRNAPaHa03g22970.1
exon
part_ofPaHa03g22970.1-exon-3-1787993825:66739125..66739219mRNAPaHa03g22970.1
exon
part_ofPaHa03g22970.1-exon-3-1787993825:66740028..66740085mRNAPaHa03g22970.1
exon
part_ofPaHa03g22970.1-exon-3-1787993825:66740531..66740582mRNAPaHa03g22970.1
exon
part_ofPaHa03g22970.1-exon-3-1787993825:66744090..66744247mRNAPaHa03g22970.1
exon
part_ofPaHa03g22970.1-exon-3-1787993825:66744662..66744904mRNAPaHa03g22970.1
exon
part_ofPaHa03g22970.1-exon-3-1787993825:66749384..66749761mRNAPaHa03g22970.1
