Feature identity
- Identifier
- PaHa03g23580.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 837 bp
- Genomic location
- 3:67,562,481–67,566,184
- Strand
- +
Hass · mRNA
PaHa03g23580.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 837
- bp
- 3:67,562,481–67,566,184
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g23580
- eggNOG
- Preferred name: LOC103719222 | Seed ortholog: 337451.A0A443NMQ5 | COG: S | eggNOG OG: PCI@131567|LE-15, eIF3_N@2759|A-1
- Gene Ontology
- GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005852 eukaryotic translation initiation factor 3 complex; GO:0006352 DNA-templated transcription initiation; GO:0006412 translation; GO:0008180 COP9 signalosome; GO:0009640 photomorphogenesis; GO:0009908 flower development; GO:0030371 translation repressor activity; GO:0031597 cytosolic proteasome complex
- KEGG
- EC: ec:2.6.1.62, ec:6.3.3.3 | KO: K03250 | Pathway: 03010 | Module: M00123 | BRITE: 00001, 03012, 03051, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g23580.1-protein
derives_frommRNAPaHa03g23580.1
mRNAPaHa03g23580.1
part_ofgenePaHa03g23580
CDS
part_ofPaHa03g23580.1-CDS-3-1787993825:67562481..67562570mRNAPaHa03g23580.1
CDS
part_ofPaHa03g23580.1-CDS-3-1787993825:67562783..67562977mRNAPaHa03g23580.1
CDS
part_ofPaHa03g23580.1-CDS-3-1787993825:67563206..67563334mRNAPaHa03g23580.1
CDS
part_ofPaHa03g23580.1-CDS-3-1787993825:67563977..67564024mRNAPaHa03g23580.1
CDS
part_ofPaHa03g23580.1-CDS-3-1787993825:67564102..67564172mRNAPaHa03g23580.1
CDS
part_ofPaHa03g23580.1-CDS-3-1787993825:67565524..67565743mRNAPaHa03g23580.1
CDS
part_ofPaHa03g23580.1-CDS-3-1787993825:67566101..67566184mRNAPaHa03g23580.1
exon
part_ofPaHa03g23580.1-exon-3-1787993825:67562481..67562570mRNAPaHa03g23580.1
exon
part_ofPaHa03g23580.1-exon-3-1787993825:67562783..67562977mRNAPaHa03g23580.1
exon
part_ofPaHa03g23580.1-exon-3-1787993825:67563206..67563334mRNAPaHa03g23580.1
exon
part_ofPaHa03g23580.1-exon-3-1787993825:67563977..67564024mRNAPaHa03g23580.1
exon
part_ofPaHa03g23580.1-exon-3-1787993825:67564102..67564172mRNAPaHa03g23580.1
exon
part_ofPaHa03g23580.1-exon-3-1787993825:67565524..67565743mRNAPaHa03g23580.1
exon
part_ofPaHa03g23580.1-exon-3-1787993825:67566101..67566184mRNAPaHa03g23580.1
