Hass · gene

PaHa12g12370

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

636
bp
12:40,117,509–40,129,081
genomic location
Record overview

Feature identity

Identifier
PaHa12g12370
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
636 bp
Genomic location
12:40,117,509–40,129,081
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: myoD | Seed ortholog: 337451.A0A443Q0G7 | COG: S | eggNOG OG: Myosin_TH1@131567|A-1*, Myosin_TH1@2759|C-2!
Gene Ontology
GO:0000146 microfilament motor activity; GO:0000281 mitotic cytokinesis; GO:0001411 hyphal tip; GO:0001570 vasculogenesis; GO:0001701 in utero embryonic development; GO:0001822 kidney development; GO:0001891 phagocytic cup; GO:0002446 neutrophil mediated immunity; GO:0002456 T cell mediated immunity; GO:0003094 glomerular filtration; GO:0003146 heart jogging; GO:0003774 cytoskeletal motor activity; GO:0003779 actin binding; GO:0005102 signaling receptor binding; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005524 ATP binding; GO:0005543 phospholipid binding; GO:0005546 phosphatidylinositol-4,5-bisphosphate binding; GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding; GO:0005628 prospore membrane; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005768 endosome; GO:0005769 early endosome; GO:0005829 cytosol; GO:0005856 cytoskeleton; GO:0005884 actin filament; GO:0005886 plasma membrane; GO:0005902 microvillus; GO:0005903 brush border; GO:0005911 cell-cell junction; GO:0005912 adherens junction; GO:0005933 cellular bud; GO:0005934 cellular bud tip; GO:0005935 cellular bud neck; GO:0005938 cell cortex; GO:0006338 chromatin remodeling; GO:0006612 protein targeting to membrane; GO:0006887 exocytosis; GO:0006892 post-Golgi vesicle-mediated transport; GO:0006897 endocytosis; GO:0006898 receptor-mediated endocytosis; GO:0006907 pinocytosis; GO:0006909 phagocytosis; GO:0006911 phagocytosis, engulfment; GO:0006970 response to osmotic stress; GO:0007015 actin filament organization; GO:0007032 endosome organization; GO:0007052 mitotic spindle organization; GO:0007121 bipolar cellular bud site selection; GO:0007162 negative regulation of cell adhesion; GO:0007368 determination of left/right symmetry; GO:0007399 nervous system development; GO:0007498 mesoderm development; GO:0007605 sensory perception of sound; GO:0008017 microtubule binding; GO:0008150 biological_process; GO:0008289 lipid binding; GO:0009267 cellular response to starvation; GO:0009617 response to bacterium; GO:0009620 response to fungus; GO:0009651 response to salt stress; GO:0009898 cytoplasmic side of plasma membrane; GO:0009925 basal plasma membrane; GO:0009932 cell tip growth; GO:0010008 endosome membrane; GO:0015629 actin cytoskeleton; GO:0016020 membrane; GO:0016197 endosomal transport; GO:0016323 basolateral plasma membrane; GO:0016324 apical plasma membrane; GO:0016328 lateral plasma membrane; GO:0016459 myosin complex; GO:0016461 unconventional myosin complex; GO:0016604 nuclear body; GO:0016887 ATP hydrolysis activity; GO:0017022 myosin binding; GO:0019904 protein domain specific binding; GO:0030011 maintenance of cell polarity; GO:0030027 lamellipodium; GO:0030033 microvillus assembly; GO:0030036 actin cytoskeleton organization; GO:0030041 actin filament polymerization; GO:0030048 actin filament-based movement; GO:0030050 vesicle transport along actin filament; GO:0030097 hemopoiesis; GO:0030175 filopodium; GO:0030335 positive regulation of cell migration; GO:0030424 axon; GO:0030426 growth cone; GO:0030428 cell septum; GO:0030447 filamentous growth; GO:0030479 actin cortical patch; GO:0030587 sorocarp development; GO:0030659 cytoplasmic vesicle membrane; GO:0030670 phagocytic vesicle membrane; GO:0030673 axolemma; GO:0030674 protein-macromolecule adaptor activity; GO:0030838 positive regulation of actin filament polymerization; GO:0030864 cortical actin cytoskeleton; GO:0030900 forebrain development; GO:0030989 dynein-driven meiotic oscillatory nuclear movement; GO:0031143 pseudopodium; GO:0031152 aggregation involved in sorocarp development; GO:0031252 cell leading edge; GO:0031256 leading edge membrane; GO:0031260 pseudopodium membrane; GO:0031267 small GTPase binding; GO:0031410 cytoplasmic vesicle; GO:0031505 fungal-type cell wall organization; GO:0031528 microvillus membrane; GO:0031589 cell-substrate adhesion; GO:0031941 filamentous actin; GO:0032009 early phagosome; GO:0032027 myosin light chain binding; GO:0032153 cell division site; GO:0032420 stereocilium; GO:0032421 stereocilium bundle; GO:0032437 cuticular plate; GO:0032456 endocytic recycling; GO:0032528 microvillus organization; GO:0032587 ruffle membrane; GO:0032588 trans-Golgi network membrane; GO:0032835 glomerulus development; GO:0032836 glomerular basement membrane development; GO:0032880 regulation of protein localization; GO:0032956 regulation of actin cytoskeleton organization; GO:0032991 protein-containing complex; GO:0033275 actin-myosin filament sliding; GO:0033572 transferrin transport; GO:0035091 phosphatidylinositol binding; GO:0035166 post-embryonic hemopoiesis; GO:0035469 determination of pancreatic left/right asymmetry; GO:0036166 phenotypic switching; GO:0036170 filamentous growth of a population of unicellular organisms in response to starvation; GO:0036180 filamentous growth of a population of unicellular organisms in response to biotic stimulus; GO:0036187 cell growth mode switching, budding to filamentous; GO:0038084 vascular endothelial growth factor signaling pathway; GO:0038096 Fc-gamma receptor signaling pathway involved in phagocytosis; GO:0042641 actomyosin; GO:0042742 defense response to bacterium; GO:0042802 identical protein binding; GO:0043005 neuron projection; GO:0043025 neuronal cell body; GO:0043204 perikaryon; GO:0043209 myelin sheath; GO:0043312 neutrophil degranulation; GO:0043325 phosphatidylinositol-3,4-bisphosphate binding; GO:0043327 chemotaxis to cAMP; GO:0043332 mating projection tip; GO:0044655 phagosome reneutralization; GO:0044656 regulation of post-lysosomal vacuole size; GO:0044853 plasma membrane raft; GO:0044877 protein-containing complex binding; GO:0045088 regulation of innate immune response; GO:0045121 membrane raft; GO:0045160 myosin I complex; GO:0045177 apical part of cell; GO:0045296 cadherin binding; GO:0045334 clathrin-coated endocytic vesicle; GO:0045335 phagocytic vesicle; GO:0045943 positive regulation of transcription by RNA polymerase I; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0045945 positive regulation of transcription by RNA polymerase III; GO:0046847 filopodium assembly; GO:0048008 platelet-derived growth factor receptor signaling pathway; GO:0048306 calcium-dependent protein binding; GO:0048471 perinuclear region of cytoplasm; GO:0048803 imaginal disc-derived male genitalia morphogenesis; GO:0048870 cell motility; GO:0050830 defense response to Gram-positive bacterium; GO:0051015 actin filament binding; GO:0051017 actin filament bundle assembly; GO:0051233 spindle midzone; GO:0051285 cell cortex of cell tip; GO:0051286 cell tip; GO:0051641 cellular localization; GO:0051648 vesicle localization; GO:0051666 actin cortical patch localization; GO:0051707 response to other organism; GO:0060287 epithelial cilium movement involved in determination of left/right asymmetry; GO:0060576 intestinal epithelial cell development; GO:0061525 hindgut development; GO:0061645 endocytic patch; GO:0061709 reticulophagy; GO:0061760 antifungal innate immune response; GO:0061851 leading edge of lamellipodium; GO:0061966 establishment of left/right asymmetry; GO:0062201 actin wave; GO:0070062 extracellular exosome; GO:0070121 Kupffer's vesicle development; GO:0070161 anchoring junction; GO:0070685 macropinocytic cup; GO:0070686 macropinocytic cup membrane; GO:0070687 macropinocytic cup cytoskeleton; GO:0071346 cellular response to type II interferon; GO:0071907 determination of digestive tract left/right asymmetry; GO:0071910 determination of liver left/right asymmetry; GO:0071933 Arp2/3 complex binding; GO:0071944 cell periphery; GO:0071976 cell gliding; GO:0072015 podocyte development; GO:0072583 clathrin-dependent endocytosis; GO:0072678 T cell migration; GO:0090023 positive regulation of neutrophil chemotaxis; GO:0090314 positive regulation of protein targeting to membrane; GO:0097203 phagocytic cup lip; GO:0097440 apical dendrite; GO:0098858 actin-based cell projection; GO:0110016 B-WICH complex; GO:0120117 T cell meandering migration; GO:0120320 lateral pseudopodium retraction; GO:0141111 positive regulation of cGAS/STING signaling pathway; GO:1900078 positive regulation of cellular response to insulin stimulus; GO:1900107 regulation of nodal signaling pathway; GO:1903013 response to differentiation-inducing factor 1; GO:1904888 cranial skeletal system development; GO:1990498 mitotic spindle microtubule; GO:2000601 positive regulation of Arp2/3 complex-mediated actin nucleation; GO:2000810 regulation of bicellular tight junction assembly
KEGG
EC: ec:2.7.11.1 | KO: K10356, K13303 | Pathway: 04814, 05130 | BRITE: 00001, 01000, 01001, 01009, 03036, 04131, 04147, 04812
Biological context

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