Feature identity
- Identifier
- PaHa_c146g00030
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 585 bp
- Genomic location
- unplaced_contig_146:27,782–29,380
- Strand
- +
Hass · gene
PaHa_c146g00030
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 585
- bp
- unplaced_contig_146:27,782–29,380
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: rpoB | Seed ortholog: 1133592.ASNER_025 | COG: COG0085 | eggNOG OG: RNA_pol_Rpb2_1@131567|A-1, RNA_pol_Rpb2_2@131567|A-1, RNA_pol_Rpb2_3@131567|A-1, RNA_pol_Rpb2_45@131567|A-1, RNA_pol_Rpb2_6@131567|A-1, RNA_pol_Rpb2_7@131567|A-1
- Gene Ontology
- GO:0000345 cytosolic DNA-directed RNA polymerase complex; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006352 DNA-templated transcription initiation; GO:0006879 intracellular iron ion homeostasis; GO:0008023 transcription elongation factor complex; GO:0009408 response to heat; GO:0016020 membrane; GO:0031564 transcription antitermination; GO:0032784 regulation of DNA-templated transcription elongation; GO:0034062 5'-3' RNA polymerase activity; GO:0036460 cellular response to cell envelope stress; GO:0042128 nitrate assimilation; GO:0044780 bacterial-type flagellum assembly; GO:0048870 cell motility; GO:0071281 cellular response to iron ion; GO:0071973 bacterial-type flagellum-dependent cell motility; GO:0090605 submerged biofilm formation; GO:2000142 regulation of DNA-templated transcription initiation
- KEGG
- EC: ec:2.7.7.6 | KO: K03043 | Pathway: 03020 | BRITE: 00001, 01000, 01611, 03021, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
genePaHa_c146g00030
