Feature identity
- Identifier
- PaHa03g30970.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 582 bp
- Genomic location
- 3:80,942,309–80,948,392
- Strand
- −
Hass · mRNA
PaHa03g30970.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 582
- bp
- 3:80,942,309–80,948,392
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g30970
- eggNOG
- Preferred name: PEX4 | Seed ortholog: 337451.A0A3S3MYL2 | COG: S | eggNOG OG: UQ_con@131567|GA-13, UQ_con@2759|RT-17
- Gene Ontology
- GO:0004842 ubiquitin-protein transferase activity; GO:0005739 mitochondrion; GO:0005778 peroxisomal membrane; GO:0006635 fatty acid beta-oxidation; GO:0007031 peroxisome organization; GO:0016558 protein import into peroxisome matrix; GO:0016562 protein import into peroxisome matrix, receptor recycling; GO:0016567 protein ubiquitination; GO:0061631 ubiquitin conjugating enzyme activity
- KEGG
- EC: ec:2.3.2.23 | KO: K10689 | Pathway: 03083, 04013, 04120, 04141, 04624 | BRITE: 00001, 01000, 04121
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g30970.1-protein
derives_frommRNAPaHa03g30970.1
mRNAPaHa03g30970.1
part_ofgenePaHa03g30970
CDS
part_ofPaHa03g30970.1-CDS-3-1787993825:80942309..80942420mRNAPaHa03g30970.1
CDS
part_ofPaHa03g30970.1-CDS-3-1787993825:80942574..80942658mRNAPaHa03g30970.1
CDS
part_ofPaHa03g30970.1-CDS-3-1787993825:80944031..80944160mRNAPaHa03g30970.1
CDS
part_ofPaHa03g30970.1-CDS-3-1787993825:80945772..80945900mRNAPaHa03g30970.1
CDS
part_ofPaHa03g30970.1-CDS-3-1787993825:80946002..80946121mRNAPaHa03g30970.1
CDS
part_ofPaHa03g30970.1-CDS-3-1787993825:80948387..80948392mRNAPaHa03g30970.1
exon
part_ofPaHa03g30970.1-exon-3-1787993825:80942309..80942420mRNAPaHa03g30970.1
exon
part_ofPaHa03g30970.1-exon-3-1787993825:80942574..80942658mRNAPaHa03g30970.1
exon
part_ofPaHa03g30970.1-exon-3-1787993825:80944031..80944160mRNAPaHa03g30970.1
exon
part_ofPaHa03g30970.1-exon-3-1787993825:80945772..80945900mRNAPaHa03g30970.1
exon
part_ofPaHa03g30970.1-exon-3-1787993825:80946002..80946121mRNAPaHa03g30970.1
exon
part_ofPaHa03g30970.1-exon-3-1787993825:80948387..80948392mRNAPaHa03g30970.1
