Feature identity
- Identifier
- PaHa_c162g00060
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 741 bp
- Genomic location
- unplaced_contig_162:6,282–7,022
- Strand
- −
Hass · gene
PaHa_c162g00060
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 741
- bp
- unplaced_contig_162:6,282–7,022
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: rhp3 | Seed ortholog: 857340.A0A086T4F1 | COG: S | eggNOG OG: DEAD_2@131567|A-1, DEAD_2@2759|Fe-12, HBB@131567|A-1, Helicase_C_2@131567|C-2!, Helicase_C_2@2759|Dc-11
- Gene Ontology
- GO:0000019 regulation of mitotic recombination; GO:0000112 nucleotide-excision repair factor 3 complex; GO:0000439 transcription factor TFIIH core complex; GO:0003678 DNA helicase activity; GO:0003684 damaged DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005675 transcription factor TFIIH holo complex; GO:0005829 cytosol; GO:0006289 nucleotide-excision repair; GO:0006366 transcription by RNA polymerase II; GO:0006367 transcription initiation at RNA polymerase II promoter; GO:0008094 ATP-dependent activity, acting on DNA; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0016887 ATP hydrolysis activity; GO:0043139 5'-3' DNA helicase activity; GO:0045951 positive regulation of mitotic recombination; GO:0051539 4 iron, 4 sulfur cluster binding
- KEGG
- EC: ec:5.6.2.3 | KO: K10844 | Pathway: 03022, 03420 | BRITE: 00001, 01000, 03021, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
genePaHa_c162g00060
