Feature identity
- Identifier
- PaHa_c162g00320
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 5,079 bp
- Genomic location
- unplaced_contig_162:31,790–37,054
- Strand
- +
Hass · gene
PaHa_c162g00320
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 5,079
- bp
- unplaced_contig_162:31,790–37,054
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: rpa1 | Seed ortholog: 1328760.A0A165IPN4 | COG: COG0086 | eggNOG OG: RNA_pol_Rpb1_1@131567|A-1, RNA_pol_Rpb1_2@131567|A-1, RNA_pol_Rpb1_3@131567|A-1, RNA_pol_Rpb1_4@131567|A-1, RNA_pol_Rpb1_5@131567|A-1
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0003899 DNA-directed RNA polymerase activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005736 RNA polymerase I complex; GO:0005829 cytosol; GO:0006360 transcription by RNA polymerase I; GO:0006361 transcription initiation at RNA polymerase I promoter; GO:0006362 transcription elongation by RNA polymerase I; GO:0006363 termination of RNA polymerase I transcription; GO:0006366 transcription by RNA polymerase II; GO:0008270 zinc ion binding; GO:0034062 5'-3' RNA polymerase activity; GO:0042790 nucleolar large rRNA transcription by RNA polymerase I; GO:1990841 promoter-specific chromatin binding
- KEGG
- EC: ec:2.7.7.6 | KO: K02999 | Pathway: 03020 | BRITE: 00001, 01000, 01611, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
genePaHa_c162g00320
