Feature identity
- Identifier
- PaHa_c171g00140
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,029 bp
- Genomic location
- unplaced_contig_171:16,711–17,945
- Strand
- +
Hass · gene
PaHa_c171g00140
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,029
- bp
- unplaced_contig_171:16,711–17,945
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: sdo1 | Seed ortholog: 1168221.R7YKA3 | COG: COG1500 | eggNOG OG: SBDS@131567|C-2, SBDS_C@131567|A-1, SBDS_domain_II@131567|A-1
- Gene Ontology
- GO:0003674 molecular_function; GO:0005085 guanyl-nucleotide exchange factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006364 rRNA processing; GO:0008150 biological_process; GO:0030687 preribosome, large subunit precursor; GO:0042134 rRNA primary transcript binding; GO:0042254 ribosome biogenesis; GO:0042256 cytosolic ribosome assembly; GO:0070180 large ribosomal subunit rRNA binding; GO:0070181 small ribosomal subunit rRNA binding; GO:1990932 5.8S rRNA binding
- KEGG
- EC: ec:3.6.4.7, ec:5.6.2.4 | KO: K14574 | Pathway: 03008 | BRITE: 00001, 03009
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
genePaHa_c171g00140
