Feature identity
- Identifier
- PaHa_c193g00090
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,414 bp
- Genomic location
- unplaced_contig_193:12,109–15,878
- Strand
- +
Hass · gene
PaHa_c193g00090
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,414
- bp
- unplaced_contig_193:12,109–15,878
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: SUZ12 | Seed ortholog: 1328760.A0A165AJQ8 | COG: S | eggNOG OG: VEFS-Box@2759|A-1
- Gene Ontology
- GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0001222 transcription corepressor binding; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006325 chromatin organization; GO:0006346 DNA methylation-dependent constitutive heterochromatin formation; GO:0008047 enzyme activator activity; GO:0008150 biological_process; GO:0008284 positive regulation of cell population proliferation; GO:0009409 response to cold; GO:0009908 flower development; GO:0009910 negative regulation of flower development; GO:0010048 vernalization response; GO:0010467 gene expression; GO:0022008 neurogenesis; GO:0031400 negative regulation of protein modification process; GO:0031490 chromatin DNA binding; GO:0031491 nucleosome binding; GO:0031507 heterochromatin formation; GO:0032682 negative regulation of chemokine production; GO:0042054 histone methyltransferase activity; GO:0043565 sequence-specific DNA binding; GO:0045596 negative regulation of cell differentiation; GO:0045892 negative regulation of DNA-templated transcription; GO:0048586 regulation of long-day photoperiodism, flowering; GO:0048709 oligodendrocyte differentiation; GO:0050680 negative regulation of epithelial cell proliferation; GO:0060816 random inactivation of X chromosome; GO:0062072 histone H3K9me2/3 reader activity; GO:0106222 lncRNA binding; GO:0140718 facultative heterochromatin formation; GO:0141044 epigenetic programming in the endosperm; GO:1990841 promoter-specific chromatin binding; GO:2000014 regulation of endosperm development; GO:2001229 negative regulation of response to gamma radiation
- KEGG
- KO: K11463 | Pathway: 03083 | BRITE: 00001, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
genePaHa_c193g00090
