Feature identity
- Identifier
- PaHa03g33360.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,206 bp
- Genomic location
- 3:84,850,482–84,860,804
- Strand
- +
Hass · mRNA
PaHa03g33360.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,206
- bp
- 3:84,850,482–84,860,804
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g33360
- eggNOG
- Preferred name: SPT | Seed ortholog: 337451.A0A3S3MD39 | COG: S | eggNOG OG: HLH@131221|BVX-22, HLH@131567|Zg-14!, HLH@1437183|LSO-35, HLH@3193|CEo-24, HLH@33090|AbI-19, HLH@35493|AqB-20, HLH@58023|GdX-31
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007623 circadian rhythm; GO:0009409 response to cold; GO:0010047 fruit dehiscence; GO:0010114 response to red light; GO:0010154 fruit development; GO:0010187 negative regulation of seed germination; GO:0042802 identical protein binding; GO:0048440 carpel development
- KEGG
- KO: K12126 | Pathway: 04075, 04712 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g33360.1-protein
derives_frommRNAPaHa03g33360.1
mRNAPaHa03g33360.1
part_ofgenePaHa03g33360
CDS
part_ofPaHa03g33360.1-CDS-3-1787993825:84850482..84850970mRNAPaHa03g33360.1
CDS
part_ofPaHa03g33360.1-CDS-3-1787993825:84851082..84851180mRNAPaHa03g33360.1
CDS
part_ofPaHa03g33360.1-CDS-3-1787993825:84851612..84851677mRNAPaHa03g33360.1
CDS
part_ofPaHa03g33360.1-CDS-3-1787993825:84851773..84851838mRNAPaHa03g33360.1
CDS
part_ofPaHa03g33360.1-CDS-3-1787993825:84859802..84860122mRNAPaHa03g33360.1
CDS
part_ofPaHa03g33360.1-CDS-3-1787993825:84860201..84860256mRNAPaHa03g33360.1
CDS
part_ofPaHa03g33360.1-CDS-3-1787993825:84860384..84860482mRNAPaHa03g33360.1
CDS
part_ofPaHa03g33360.1-CDS-3-1787993825:84860795..84860804mRNAPaHa03g33360.1
exon
part_ofPaHa03g33360.1-exon-3-1787993825:84850482..84850970mRNAPaHa03g33360.1
exon
part_ofPaHa03g33360.1-exon-3-1787993825:84851082..84851180mRNAPaHa03g33360.1
exon
part_ofPaHa03g33360.1-exon-3-1787993825:84851612..84851677mRNAPaHa03g33360.1
exon
part_ofPaHa03g33360.1-exon-3-1787993825:84851773..84851838mRNAPaHa03g33360.1
exon
part_ofPaHa03g33360.1-exon-3-1787993825:84859802..84860122mRNAPaHa03g33360.1
exon
part_ofPaHa03g33360.1-exon-3-1787993825:84860201..84860256mRNAPaHa03g33360.1
exon
part_ofPaHa03g33360.1-exon-3-1787993825:84860384..84860482mRNAPaHa03g33360.1
exon
part_ofPaHa03g33360.1-exon-3-1787993825:84860795..84860804mRNAPaHa03g33360.1
