Feature identity
- Identifier
- PaHa_c362g00230
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,196 bp
- Genomic location
- unplaced_contig_362:30,303–32,545
- Strand
- −
Hass · gene
PaHa_c362g00230
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,196
- bp
- unplaced_contig_362:30,303–32,545
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: KRE6 | Seed ortholog: 331657.A0A4U0XG77 | COG: COG0532 | eggNOG OG: GTP_EFTU@131567|AR-9, GTP_EFTU_D2@131567|B-2, IF-2@131567|A-1, SKN1_KRE6_Sbg1@131567|A-1, SKN1_KRE6_Sbg1@4751|DL-10
- Gene Ontology
- GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000920 septum digestion after cytokinesis; GO:0001732 formation of cytoplasmic translation initiation complex; GO:0002183 cytoplasmic translational initiation; GO:0003674 molecular_function; GO:0003743 translation initiation factor activity; GO:0003924 GTPase activity; GO:0005525 GTP binding; GO:0005575 cellular_component; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0005935 cellular bud neck; GO:0006078 (1->6)-beta-D-glucan biosynthetic process; GO:0006413 translational initiation; GO:0006446 regulation of translational initiation; GO:0008150 biological_process; GO:0008422 beta-glucosidase activity; GO:0009272 fungal-type cell wall biogenesis; GO:0010494 cytoplasmic stress granule; GO:0010507 negative regulation of autophagy; GO:0015926 glucosidase activity; GO:0016020 membrane; GO:0022627 cytosolic small ribosomal subunit; GO:0030133 transport vesicle; GO:0030148 sphingolipid biosynthetic process; GO:0030427 site of polarized growth; GO:0031369 translation initiation factor binding; GO:0031505 fungal-type cell wall organization; GO:0033290 eukaryotic 48S preinitiation complex; GO:0034406 cell wall beta-glucan metabolic process; GO:0042255 ribosome assembly; GO:0042256 cytosolic ribosome assembly; GO:0043022 ribosome binding; GO:0043295 glutathione binding; GO:0062040 fungal biofilm matrix; GO:0070181 small ribosomal subunit rRNA binding; GO:0070879 fungal-type cell wall beta-glucan metabolic process; GO:0071554 cell wall organization or biogenesis
- KEGG
- KO: K21850 | BRITE: 00001, 04131 | CAZy: GH16|Glycoside Hydrolase Family 16.
Biological context
Connected feature records
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genePaHa_c362g00230
