Hass · gene

PaHa_c373g00070

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,836
bp
unplaced_contig_373:5,872–8,633
genomic location
Record overview

Feature identity

Identifier
PaHa_c373g00070
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
1,836 bp
Genomic location
unplaced_contig_373:5,872–8,633
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: Eif4e2 | Seed ortholog: 1043004.A0A074WNY6 | COG: S | eggNOG OG: IF4E@131567|A-1*, IF4E@2759|AM-12
Gene Ontology
GO:0000340 RNA 7-methylguanosine cap binding; GO:0000342 RNA cap 4 binding; GO:0000900 mRNA regulatory element binding translation repressor activity; GO:0000932 P-body; GO:0001525 angiogenesis; GO:0001701 in utero embryonic development; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005829 cytosol; GO:0009625 response to insect; GO:0010494 cytoplasmic stress granule; GO:0010608 post-transcriptional regulation of gene expression; GO:0016281 eukaryotic translation initiation factor 4F complex; GO:0017148 negative regulation of translation; GO:0030371 translation repressor activity; GO:0031625 ubiquitin protein ligase binding; GO:0035278 miRNA-mediated gene silencing by inhibition of translation; GO:0045947 negative regulation of translational initiation; GO:0045998 positive regulation of ecdysteroid biosynthetic process; GO:0060337 type I interferon-mediated signaling pathway; GO:0060339 negative regulation of type I interferon-mediated signaling pathway; GO:0072344 rescue of stalled cytosolic ribosome; GO:0097165 nuclear stress granule; GO:0098808 mRNA cap binding; GO:1903502 translation repressor complex
KEGG
KO: K03259 | Pathway: 01521, 04066, 04150, 04151, 04211, 04910 | BRITE: 00001, 03012, 03019
Biological context

Connected feature records

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