Feature identity
- Identifier
- PaHa03g35660.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,011 bp
- Genomic location
- 3:88,445,712–88,451,549
- Strand
- −
Hass · mRNA
PaHa03g35660.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,011
- bp
- 3:88,445,712–88,451,549
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g35660
- eggNOG
- Preferred name: LOC104597428 | Seed ortholog: 337451.A0A3S3NDY8 | COG: S | eggNOG OG: Myb_DNA-binding@131221|LYW-44, Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|Mih-45, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|UPw-51, Myb_DNA-binding@35493|IIv-41
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009834 plant-type secondary cell wall biogenesis; GO:0045893 positive regulation of DNA-templated transcription; GO:0050832 defense response to fungus; GO:1901348 positive regulation of secondary cell wall biogenesis; GO:2000652 regulation of secondary cell wall biogenesis
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g35660.1-protein
derives_frommRNAPaHa03g35660.1
mRNAPaHa03g35660.1
part_ofgenePaHa03g35660
CDS
part_ofPaHa03g35660.1-CDS-3-1787993825:88445712..88446417mRNAPaHa03g35660.1
CDS
part_ofPaHa03g35660.1-CDS-3-1787993825:88451245..88451549mRNAPaHa03g35660.1
exon
part_ofPaHa03g35660.1-exon-3-1787993825:88445712..88446417mRNAPaHa03g35660.1
exon
part_ofPaHa03g35660.1-exon-3-1787993825:88451245..88451549mRNAPaHa03g35660.1
