Feature identity
- Identifier
- PaHa03g40100.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 915 bp
- Genomic location
- 3:95,584,593–95,586,158
- Strand
- −
Hass · mRNA
PaHa03g40100.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 915
- bp
- 3:95,584,593–95,586,158
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g40100
- eggNOG
- Preferred name: LOC104586653 | Seed ortholog: 337451.A0A3S3M6R2 | COG: S | eggNOG OG: Myb_DNA-binding@131221|LYW-44, Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|Mih-45, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|QXL-48, Myb_DNA-binding@35493|IIv-41
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009834 plant-type secondary cell wall biogenesis
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g40100.1-protein
derives_frommRNAPaHa03g40100.1
mRNAPaHa03g40100.1
part_ofgenePaHa03g40100
CDS
part_ofPaHa03g40100.1-CDS-3-1787993825:95584593..95585244mRNAPaHa03g40100.1
CDS
part_ofPaHa03g40100.1-CDS-3-1787993825:95585340..95585469mRNAPaHa03g40100.1
CDS
part_ofPaHa03g40100.1-CDS-3-1787993825:95586026..95586158mRNAPaHa03g40100.1
exon
part_ofPaHa03g40100.1-exon-3-1787993825:95584593..95585244mRNAPaHa03g40100.1
exon
part_ofPaHa03g40100.1-exon-3-1787993825:95585340..95585469mRNAPaHa03g40100.1
exon
part_ofPaHa03g40100.1-exon-3-1787993825:95586026..95586158mRNAPaHa03g40100.1
