Feature identity
- Identifier
- PaHa04g01660.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 933 bp
- Genomic location
- 4:4,487,824–4,489,088
- Strand
- −
Hass · mRNA
PaHa04g01660.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 933
- bp
- 4:4,487,824–4,489,088
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g01660
- eggNOG
- Preferred name: WRKY11 | Seed ortholog: 337451.A0A443PL17 | COG: S | eggNOG OG: Plant_zn_clust@131567|A-1*, Plant_zn_clust@1437183|u-6!, Plant_zn_clust@3193|C-2, Plant_zn_clust@3398|O-4, WRKY@131567|A-1*, WRKY@1437183|ArP-27, WRKY@2759|CB-10, WRKY@3193|lG-20, WRKY@33090|Ic-14, WRKY@3398|zS-22
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0009617 response to bacterium; GO:0009682 induced systemic resistance; GO:0009737 response to abscisic acid; GO:0009739 response to gibberellin; GO:0009938 negative regulation of gibberellic acid mediated signaling pathway; GO:0042742 defense response to bacterium; GO:1990841 promoter-specific chromatin binding; GO:2000022 regulation of jasmonic acid mediated signaling pathway
- KEGG
- KO: K13425 | Pathway: 04016, 04626 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g01660.1-protein
derives_frommRNAPaHa04g01660.1
mRNAPaHa04g01660.1
part_ofgenePaHa04g01660
CDS
part_ofPaHa04g01660.1-CDS-4-1787993825:4487824..4487998mRNAPaHa04g01660.1
CDS
part_ofPaHa04g01660.1-CDS-4-1787993825:4488089..4488214mRNAPaHa04g01660.1
CDS
part_ofPaHa04g01660.1-CDS-4-1787993825:4488457..4489088mRNAPaHa04g01660.1
exon
part_ofPaHa04g01660.1-exon-4-1787993825:4487824..4487998mRNAPaHa04g01660.1
exon
part_ofPaHa04g01660.1-exon-4-1787993825:4488089..4488214mRNAPaHa04g01660.1
exon
part_ofPaHa04g01660.1-exon-4-1787993825:4488457..4489088mRNAPaHa04g01660.1
