PaHa04g04150.1

Hass · mRNA

PaHa04g04150.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,512
bp
4:10,016,485–10,028,042
genomic location
Record overview

Feature identity

Identifier
PaHa04g04150.1
Feature type
mRNA
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
1,512 bp
Genomic location
4:10,016,485–10,028,042
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: PaHa04g04150

eggNOG
Preferred name: BnaCnng58340D | Seed ortholog: 4432.A0A1U8B1L1 | COG: S | eggNOG OG: G-patch@131567|A-1*, G-patch@2759|F-3, zf-CCCH_4@131567|A-1*, zf-CCCH_4@2759|N-4
Gene Ontology
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0003674 molecular_function; GO:0005634 nucleus; GO:0007175 negative regulation of epidermal growth factor-activated receptor activity; GO:0045892 negative regulation of DNA-templated transcription
KEGG
EC: ec:2.1.1.215, ec:2.1.1.216 | KO: K00555, K11883, K13107 | Pathway: 03008 | BRITE: 00001, 01000, 03009, 03016, 03041, 03051
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

CDSPaHa04g04150.1-CDS-4-1787993825:10016485..10017494
part_of
CDSPaHa04g04150.1-CDS-4-1787993825:10018166..10018226
part_of
CDSPaHa04g04150.1-CDS-4-1787993825:10022836..10023144
part_of
CDSPaHa04g04150.1-CDS-4-1787993825:10027911..10028042
part_of
exonPaHa04g04150.1-exon-4-1787993825:10016485..10017494
part_of
exonPaHa04g04150.1-exon-4-1787993825:10018166..10018226
part_of
exonPaHa04g04150.1-exon-4-1787993825:10022836..10023144
part_of
exonPaHa04g04150.1-exon-4-1787993825:10027911..10028042
part_of
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