Feature identity
- Identifier
- PaHa01g01280.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,101 bp
- Genomic location
- 1:1,485,522–1,492,089
- Strand
- −
Hass · mRNA
PaHa01g01280.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,101
- bp
- 1:1,485,522–1,492,089
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g01280
- eggNOG
- Preferred name: TGA1 | Seed ortholog: 337451.A0A443NIV0 | COG: S | eggNOG OG: DOG1@131567|A-1*, DOG1@2759|CF-9, bZIP_1@131567|B-2, bZIP_1@35493|AEr-24
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway; GO:0042742 defense response to bacterium; GO:0043565 sequence-specific DNA binding
- KEGG
- KO: K14431 | Pathway: 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g01280.1-protein
derives_frommRNAPaHa01g01280.1
mRNAPaHa01g01280.1
part_ofgenePaHa01g01280
CDS
part_ofPaHa01g01280.1-CDS-1-1787993825:1485522..1485674mRNAPaHa01g01280.1
CDS
part_ofPaHa01g01280.1-CDS-1-1787993825:1486434..1486670mRNAPaHa01g01280.1
CDS
part_ofPaHa01g01280.1-CDS-1-1787993825:1488632..1488903mRNAPaHa01g01280.1
CDS
part_ofPaHa01g01280.1-CDS-1-1787993825:1490093..1490159mRNAPaHa01g01280.1
CDS
part_ofPaHa01g01280.1-CDS-1-1787993825:1490258..1490335mRNAPaHa01g01280.1
CDS
part_ofPaHa01g01280.1-CDS-1-1787993825:1490482..1490541mRNAPaHa01g01280.1
CDS
part_ofPaHa01g01280.1-CDS-1-1787993825:1491760..1491834mRNAPaHa01g01280.1
CDS
part_ofPaHa01g01280.1-CDS-1-1787993825:1491931..1492089mRNAPaHa01g01280.1
exon
part_ofPaHa01g01280.1-exon-1-1787993825:1485522..1485674mRNAPaHa01g01280.1
exon
part_ofPaHa01g01280.1-exon-1-1787993825:1486434..1486670mRNAPaHa01g01280.1
exon
part_ofPaHa01g01280.1-exon-1-1787993825:1488632..1488903mRNAPaHa01g01280.1
exon
part_ofPaHa01g01280.1-exon-1-1787993825:1490093..1490159mRNAPaHa01g01280.1
exon
part_ofPaHa01g01280.1-exon-1-1787993825:1490258..1490335mRNAPaHa01g01280.1
exon
part_ofPaHa01g01280.1-exon-1-1787993825:1490482..1490541mRNAPaHa01g01280.1
exon
part_ofPaHa01g01280.1-exon-1-1787993825:1491760..1491834mRNAPaHa01g01280.1
exon
part_ofPaHa01g01280.1-exon-1-1787993825:1491931..1492089mRNAPaHa01g01280.1
