Feature identity
- Identifier
- PaHa04g18460.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,541 bp
- Genomic location
- 4:50,449,247–50,466,747
- Strand
- −
Hass · mRNA
PaHa04g18460.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,541
- bp
- 4:50,449,247–50,466,747
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g18460
- eggNOG
- Preferred name: LOC101771527 | Seed ortholog: 337451.A0A443PHS5 | COG: COG1094 | eggNOG OG: KH_1@131567|B-2, KH_1@2759|AR-7, KH_1@3398|iC-17, KH_1@35493|Lh-13
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:1900057 positive regulation of leaf senescence; GO:2000028 regulation of photoperiodism, flowering
- KEGG
- KO: K13210 | BRITE: 00001, 03019, 03041
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g18460.1-protein
derives_frommRNAPaHa04g18460.1
mRNAPaHa04g18460.1
part_ofgenePaHa04g18460
CDS
part_ofPaHa04g18460.1-CDS-4-1787993825:50449247..50450542mRNAPaHa04g18460.1
CDS
part_ofPaHa04g18460.1-CDS-4-1787993825:50454751..50454867mRNAPaHa04g18460.1
CDS
part_ofPaHa04g18460.1-CDS-4-1787993825:50454976..50455047mRNAPaHa04g18460.1
CDS
part_ofPaHa04g18460.1-CDS-4-1787993825:50455481..50455576mRNAPaHa04g18460.1
CDS
part_ofPaHa04g18460.1-CDS-4-1787993825:50455737..50455922mRNAPaHa04g18460.1
CDS
part_ofPaHa04g18460.1-CDS-4-1787993825:50461536..50462038mRNAPaHa04g18460.1
CDS
part_ofPaHa04g18460.1-CDS-4-1787993825:50466477..50466747mRNAPaHa04g18460.1
exon
part_ofPaHa04g18460.1-exon-4-1787993825:50449247..50450542mRNAPaHa04g18460.1
exon
part_ofPaHa04g18460.1-exon-4-1787993825:50454751..50454867mRNAPaHa04g18460.1
exon
part_ofPaHa04g18460.1-exon-4-1787993825:50454976..50455047mRNAPaHa04g18460.1
exon
part_ofPaHa04g18460.1-exon-4-1787993825:50455481..50455576mRNAPaHa04g18460.1
exon
part_ofPaHa04g18460.1-exon-4-1787993825:50455737..50455922mRNAPaHa04g18460.1
exon
part_ofPaHa04g18460.1-exon-4-1787993825:50461536..50462038mRNAPaHa04g18460.1
exon
part_ofPaHa04g18460.1-exon-4-1787993825:50466477..50466747mRNAPaHa04g18460.1
