PaHa04g20540.1

Hass · mRNA

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,604: bp
4:53,303,407–53,328,065: genomic location

Record overview

Feature identity

Identifier: PaHa04g20540.1
Feature type: mRNA
Genome collection: Hass
Organism: Persea americana-Hass
Sequence length: 2,604 bp
Genomic location: 4:53,303,407–53,328,065
Strand: −

Open original Tripal record

Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: PaHa04g20540

eggNOG: Preferred name: PIP5K8 | Seed ortholog: 337451.A0A3S3MUS1 | COG: S | eggNOG OG: MORN@131567|Gs-13, MORN@3193|DJe-32, MORN@3398|EMB-37, PIP5K@131567|A-1*, PIP5K@2759|Ac-7, PIP5K@3193|iD-20
Gene Ontology: GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity; GO:0000915 actomyosin contractile ring assembly; GO:0001727 lipid kinase activity; GO:0001786 phosphatidylserine binding; GO:0001837 epithelial to mesenchymal transition; GO:0002039 p53 binding; GO:0003007 heart morphogenesis; GO:0003383 apical constriction; GO:0003682 chromatin binding; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005524 ATP binding; GO:0005543 phospholipid binding; GO:0005737 cytoplasm; GO:0006282 regulation of DNA repair; GO:0006325 chromatin organization; GO:0006479 protein methylation; GO:0006661 phosphatidylinositol biosynthetic process; GO:0006897 endocytosis; GO:0006909 phagocytosis; GO:0006974 DNA damage response; GO:0007032 endosome organization; GO:0007165 signal transduction; GO:0007186 G protein-coupled receptor signaling pathway; GO:0007283 spermatogenesis; GO:0007286 spermatid development; GO:0007310 oocyte dorsal/ventral axis specification; GO:0007409 axonogenesis; GO:0007444 imaginal disc development; GO:0008103 oocyte microtubule cytoskeleton polarization; GO:0008104 intracellular protein localization; GO:0008150 biological_process; GO:0008654 phospholipid biosynthetic process; GO:0010314 phosphatidylinositol-5-phosphate binding; GO:0010761 fibroblast migration; GO:0016279 protein-lysine N-methyltransferase activity; GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity; GO:0016477 cell migration; GO:0018022 peptidyl-lysine methylation; GO:0018026 peptidyl-lysine monomethylation; GO:0018027 peptidyl-lysine dimethylation; GO:0019887 protein kinase regulator activity; GO:0019900 kinase binding; GO:0030036 actin cytoskeleton organization; GO:0030216 keratinocyte differentiation; GO:0030587 sorocarp development; GO:0030707 follicle cell of egg chamber development; GO:0030866 cortical actin cytoskeleton organization; GO:0031321 ascospore-type prospore assembly; GO:0032266 phosphatidylinositol-3-phosphate binding; GO:0032888 regulation of mitotic spindle elongation; GO:0036267 invasive filamentous growth; GO:0042054 histone methyltransferase activity; GO:0043327 chemotaxis to cAMP; GO:0045471 response to ethanol; GO:0045880 positive regulation of smoothened signaling pathway; GO:0045893 positive regulation of DNA-templated transcription; GO:0046488 phosphatidylinositol metabolic process; GO:0046578 regulation of Ras protein signal transduction; GO:0046843 dorsal appendage formation; GO:0046854 phosphatidylinositol phosphate biosynthetic process; GO:0048041 focal adhesion assembly; GO:0048477 oogenesis; GO:0050766 positive regulation of phagocytosis; GO:0051896 regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction; GO:0052742 phosphatidylinositol kinase activity; GO:0052810 1-phosphatidylinositol-5-kinase activity; GO:0052811 1-phosphatidylinositol-3-phosphate 4-kinase activity; GO:0060326 cell chemotaxis; GO:0070273 phosphatidylinositol-4-phosphate binding; GO:0070527 platelet aggregation; GO:0070828 heterochromatin organization; GO:0071711 basement membrane organization; GO:0071963 establishment or maintenance of cell polarity regulating cell shape; GO:0072659 protein localization to plasma membrane; GO:0090630 activation of GTPase activity; GO:0097178 ruffle assembly; GO:0097305 response to alcohol; GO:0099149 regulation of postsynaptic neurotransmitter receptor internalization; GO:0140350 inchworm-type cell migration; GO:0140938 histone H3 methyltransferase activity; GO:0140945 histone H3K4 monomethyltransferase activity; GO:1900242 regulation of synaptic vesicle endocytosis; GO:1900426 positive regulation of defense response to bacterium; GO:1902412 regulation of mitotic cytokinesis; GO:1902635 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process; GO:1903689 regulation of wound healing, spreading of epidermal cells; GO:1990147 talin binding
KEGG: EC: ec:2.7.1.68 | KO: K00889 | Pathway: 00562, 01100, 04070, 04144 | Module: M00130 | BRITE: 00001, 01000, 04131

Biological context