Feature identity
- Identifier
- PaHa04g23400.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,110 bp
- Genomic location
- 4:57,472,442–57,476,000
- Strand
- −
Hass · mRNA
PaHa04g23400.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,110
- bp
- 4:57,472,442–57,476,000
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g23400
- eggNOG
- Preferred name: AGL104 | Seed ortholog: 337451.A0A443PGH7 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|BDo-26, SRF-TF@58023|ij-20
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0010152 pollen maturation; GO:0080092 regulation of pollen tube growth
- KEGG
- KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g23400.1-protein
derives_frommRNAPaHa04g23400.1
mRNAPaHa04g23400.1
part_ofgenePaHa04g23400
CDS
part_ofPaHa04g23400.1-CDS-4-1787993825:57472442..57472579mRNAPaHa04g23400.1
CDS
part_ofPaHa04g23400.1-CDS-4-1787993825:57472830..57473022mRNAPaHa04g23400.1
CDS
part_ofPaHa04g23400.1-CDS-4-1787993825:57473451..57473578mRNAPaHa04g23400.1
CDS
part_ofPaHa04g23400.1-CDS-4-1787993825:57473775..57473825mRNAPaHa04g23400.1
CDS
part_ofPaHa04g23400.1-CDS-4-1787993825:57474066..57474165mRNAPaHa04g23400.1
CDS
part_ofPaHa04g23400.1-CDS-4-1787993825:57474283..57474344mRNAPaHa04g23400.1
CDS
part_ofPaHa04g23400.1-CDS-4-1787993825:57474554..57474581mRNAPaHa04g23400.1
CDS
part_ofPaHa04g23400.1-CDS-4-1787993825:57474716..57474777mRNAPaHa04g23400.1
CDS
part_ofPaHa04g23400.1-CDS-4-1787993825:57474909..57474927mRNAPaHa04g23400.1
CDS
part_ofPaHa04g23400.1-CDS-4-1787993825:57475086..57475139mRNAPaHa04g23400.1
CDS
part_ofPaHa04g23400.1-CDS-4-1787993825:57475320..57475507mRNAPaHa04g23400.1
CDS
part_ofPaHa04g23400.1-CDS-4-1787993825:57475914..57476000mRNAPaHa04g23400.1
exon
part_ofPaHa04g23400.1-exon-4-1787993825:57472442..57472579mRNAPaHa04g23400.1
exon
part_ofPaHa04g23400.1-exon-4-1787993825:57472830..57473022mRNAPaHa04g23400.1
exon
part_ofPaHa04g23400.1-exon-4-1787993825:57473451..57473578mRNAPaHa04g23400.1
exon
part_ofPaHa04g23400.1-exon-4-1787993825:57473775..57473825mRNAPaHa04g23400.1
exon
part_ofPaHa04g23400.1-exon-4-1787993825:57474066..57474165mRNAPaHa04g23400.1
exon
part_ofPaHa04g23400.1-exon-4-1787993825:57474283..57474344mRNAPaHa04g23400.1
exon
part_ofPaHa04g23400.1-exon-4-1787993825:57474554..57474581mRNAPaHa04g23400.1
exon
part_ofPaHa04g23400.1-exon-4-1787993825:57474716..57474777mRNAPaHa04g23400.1
exon
part_ofPaHa04g23400.1-exon-4-1787993825:57474909..57474927mRNAPaHa04g23400.1
exon
part_ofPaHa04g23400.1-exon-4-1787993825:57475086..57475139mRNAPaHa04g23400.1
exon
part_ofPaHa04g23400.1-exon-4-1787993825:57475320..57475507mRNAPaHa04g23400.1
exon
part_ofPaHa04g23400.1-exon-4-1787993825:57475914..57476000mRNAPaHa04g23400.1
