Feature identity
- Identifier
- PaHa05g07750.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,656 bp
- Genomic location
- 5:15,135,298–15,142,633
- Strand
- −
Hass · mRNA
PaHa05g07750.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,656
- bp
- 5:15,135,298–15,142,633
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g07750
- eggNOG
- Preferred name: LOC110793806 | Seed ortholog: 337451.A0A3S3QFK2 | eggNOG OG: Myb_DNA-binding@131567|Se-18, Myb_DNA-binding@33090|AxA-30, Response_reg|BDQ19H@131567, Response_reg|BDQ19H@33090
- Gene Ontology
- GO:0000156 phosphorelay response regulator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009735 response to cytokinin; GO:0009736 cytokinin-activated signaling pathway; GO:0009787 regulation of abscisic acid-activated signaling pathway; GO:0010082 regulation of root meristem growth; GO:2000022 regulation of jasmonic acid mediated signaling pathway; GO:2000031 regulation of salicylic acid mediated signaling pathway
- KEGG
- KO: K14491 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g07750.1-protein
derives_frommRNAPaHa05g07750.1
mRNAPaHa05g07750.1
part_ofgenePaHa05g07750
CDS
part_ofPaHa05g07750.1-CDS-5-1787993825:15135298..15135650mRNAPaHa05g07750.1
CDS
part_ofPaHa05g07750.1-CDS-5-1787993825:15135753..15136326mRNAPaHa05g07750.1
CDS
part_ofPaHa05g07750.1-CDS-5-1787993825:15139156..15139232mRNAPaHa05g07750.1
CDS
part_ofPaHa05g07750.1-CDS-5-1787993825:15139423..15139821mRNAPaHa05g07750.1
CDS
part_ofPaHa05g07750.1-CDS-5-1787993825:15139941..15140093mRNAPaHa05g07750.1
CDS
part_ofPaHa05g07750.1-CDS-5-1787993825:15142534..15142633mRNAPaHa05g07750.1
exon
part_ofPaHa05g07750.1-exon-5-1787993825:15135298..15135650mRNAPaHa05g07750.1
exon
part_ofPaHa05g07750.1-exon-5-1787993825:15135753..15136326mRNAPaHa05g07750.1
exon
part_ofPaHa05g07750.1-exon-5-1787993825:15139156..15139232mRNAPaHa05g07750.1
exon
part_ofPaHa05g07750.1-exon-5-1787993825:15139423..15139821mRNAPaHa05g07750.1
exon
part_ofPaHa05g07750.1-exon-5-1787993825:15139941..15140093mRNAPaHa05g07750.1
exon
part_ofPaHa05g07750.1-exon-5-1787993825:15142534..15142633mRNAPaHa05g07750.1
