Feature identity
- Identifier
- PaHa05g11660.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 996 bp
- Genomic location
- 5:38,793,751–38,795,350
- Strand
- +
Hass · mRNA
PaHa05g11660.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 996
- bp
- 5:38,793,751–38,795,350
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g11660
- eggNOG
- Preferred name: NAC078 | Seed ortholog: 337451.A0A443PVJ0 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|oz-16, NAM@35493|AE-6, NAM@58023|Abm-20
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005789 endoplasmic reticulum membrane; GO:0005886 plasma membrane; GO:0009644 response to high light intensity; GO:0009819 drought recovery; GO:0009962 regulation of flavonoid biosynthetic process; GO:0010150 leaf senescence; GO:0016020 membrane; GO:0045893 positive regulation of DNA-templated transcription; GO:2000377 regulation of reactive oxygen species metabolic process
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g11660.1-protein
derives_frommRNAPaHa05g11660.1
mRNAPaHa05g11660.1
part_ofgenePaHa05g11660
CDS
part_ofPaHa05g11660.1-CDS-5-1787993825:38793751..38794216mRNAPaHa05g11660.1
CDS
part_ofPaHa05g11660.1-CDS-5-1787993825:38794587..38794706mRNAPaHa05g11660.1
CDS
part_ofPaHa05g11660.1-CDS-5-1787993825:38794941..38795350mRNAPaHa05g11660.1
exon
part_ofPaHa05g11660.1-exon-5-1787993825:38793751..38794216mRNAPaHa05g11660.1
exon
part_ofPaHa05g11660.1-exon-5-1787993825:38794587..38794706mRNAPaHa05g11660.1
exon
part_ofPaHa05g11660.1-exon-5-1787993825:38794941..38795350mRNAPaHa05g11660.1
