Feature identity
- Identifier
- PaHa05g11960.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,485 bp
- Genomic location
- 5:39,420,513–39,433,457
- Strand
- +
Hass · mRNA
PaHa05g11960.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,485
- bp
- 5:39,420,513–39,433,457
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g11960
- eggNOG
- Preferred name: TGA9 | Seed ortholog: 337451.A0A443NYH7 | COG: S | eggNOG OG: DOG1@131567|A-1*, DOG1@2759|Iy-13, DOG1@3398|Tm-16, bZIP_1@131567|B-2, bZIP_1@3398|Cbu-32, bZIP_1@35493|AEs-24
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0002237 response to molecule of bacterial origin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0042803 protein homodimerization activity; GO:0048653 anther development; GO:0071588 hydrogen peroxide mediated signaling pathway
- KEGG
- KO: K14431 | Pathway: 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g11960.1-protein
derives_frommRNAPaHa05g11960.1
mRNAPaHa05g11960.1
part_ofgenePaHa05g11960
CDS
part_ofPaHa05g11960.1-CDS-5-1787993825:39420513..39420515mRNAPaHa05g11960.1
CDS
part_ofPaHa05g11960.1-CDS-5-1787993825:39420710..39420744mRNAPaHa05g11960.1
CDS
part_ofPaHa05g11960.1-CDS-5-1787993825:39420827..39420919mRNAPaHa05g11960.1
CDS
part_ofPaHa05g11960.1-CDS-5-1787993825:39421287..39421387mRNAPaHa05g11960.1
CDS
part_ofPaHa05g11960.1-CDS-5-1787993825:39421778..39421848mRNAPaHa05g11960.1
CDS
part_ofPaHa05g11960.1-CDS-5-1787993825:39422454..39422663mRNAPaHa05g11960.1
CDS
part_ofPaHa05g11960.1-CDS-5-1787993825:39423975..39424016mRNAPaHa05g11960.1
CDS
part_ofPaHa05g11960.1-CDS-5-1787993825:39424543..39424602mRNAPaHa05g11960.1
CDS
part_ofPaHa05g11960.1-CDS-5-1787993825:39424884..39424961mRNAPaHa05g11960.1
CDS
part_ofPaHa05g11960.1-CDS-5-1787993825:39425252..39425300mRNAPaHa05g11960.1
CDS
part_ofPaHa05g11960.1-CDS-5-1787993825:39426257..39426528mRNAPaHa05g11960.1
CDS
part_ofPaHa05g11960.1-CDS-5-1787993825:39428137..39428376mRNAPaHa05g11960.1
CDS
part_ofPaHa05g11960.1-CDS-5-1787993825:39431302..39431444mRNAPaHa05g11960.1
CDS
part_ofPaHa05g11960.1-CDS-5-1787993825:39433370..39433457mRNAPaHa05g11960.1
exon
part_ofPaHa05g11960.1-exon-5-1787993825:39420513..39420515mRNAPaHa05g11960.1
exon
part_ofPaHa05g11960.1-exon-5-1787993825:39420710..39420744mRNAPaHa05g11960.1
exon
part_ofPaHa05g11960.1-exon-5-1787993825:39420827..39420919mRNAPaHa05g11960.1
exon
part_ofPaHa05g11960.1-exon-5-1787993825:39421287..39421387mRNAPaHa05g11960.1
exon
part_ofPaHa05g11960.1-exon-5-1787993825:39421778..39421848mRNAPaHa05g11960.1
exon
part_ofPaHa05g11960.1-exon-5-1787993825:39422454..39422663mRNAPaHa05g11960.1
exon
part_ofPaHa05g11960.1-exon-5-1787993825:39423975..39424016mRNAPaHa05g11960.1
exon
part_ofPaHa05g11960.1-exon-5-1787993825:39424543..39424602mRNAPaHa05g11960.1
exon
part_ofPaHa05g11960.1-exon-5-1787993825:39424884..39424961mRNAPaHa05g11960.1
exon
part_ofPaHa05g11960.1-exon-5-1787993825:39425252..39425300mRNAPaHa05g11960.1
exon
part_ofPaHa05g11960.1-exon-5-1787993825:39426257..39426528mRNAPaHa05g11960.1
exon
part_ofPaHa05g11960.1-exon-5-1787993825:39428137..39428376mRNAPaHa05g11960.1
exon
part_ofPaHa05g11960.1-exon-5-1787993825:39431302..39431444mRNAPaHa05g11960.1
exon
part_ofPaHa05g11960.1-exon-5-1787993825:39433370..39433457mRNAPaHa05g11960.1
