Feature identity
- Identifier
- Pa01g1274
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 4,647 bp
- Genomic location
- Pa01:17,842,026–17,846,672
- Strand
- +
West Indian T2T · gene
Pa01g1274
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 4,647
- bp
- Pa01:17,842,026–17,846,672
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: AMSH1, TCX2 | Seed ortholog: 337451.A0A443NUP4, 337451.A0A443PDT6 | COG: S | eggNOG OG: JAB@131567|N-4, JAB@3193|Cb-11, JAB@3398|Ty-18, TCR@131221|Lu-19, TCR@131567|A-1*, TCR@1437183|oD-30, TCR@2759|AQ-7!, TCR@3193|OY-20, TCR@58023|hx-27, USP8_dimer@131567|A-1*, USP8_dimer@2759|C-2, USP8_dimer@3398|Is-15
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009934 regulation of meristem structural organization; GO:0010235 guard mother cell cytokinesis; GO:0010375 stomatal complex patterning; GO:0010440 stomatal lineage progression; GO:0010481 epidermal cell division; GO:0016020 membrane; GO:0048444 floral organ morphogenesis; GO:0051302 regulation of cell division; GO:0070536 protein K63-linked deubiquitination; GO:0071108 protein K48-linked deubiquitination
- KEGG
- EC: ec:3.4.19.12 | KO: K11866, K21776 | Pathway: 04144, 04218, 04814 | BRITE: 00001, 01000, 01002, 04121, 04131
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa01g1274.1
part_ofgenePa01g1274
mRNAPa01g1274.2
part_ofgenePa01g1274
