West Indian T2T · gene

Pa01g1541

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

5,899
bp
Pa01:22,380,934–22,386,832
genomic location
Record overview

Feature identity

Identifier
Pa01g1541
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
5,899 bp
Genomic location
Pa01:22,380,934–22,386,832
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: 14-3-3 | Seed ortholog: 337451.A0A3S3MGU4 | COG: S | eggNOG OG: 14-3-3@131567|C-2!
Gene Ontology
GO:0000325 plant-type vacuole; GO:0003677 DNA binding; GO:0005509 calcium ion binding; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005618 cell wall; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005794 Golgi apparatus; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006995 cellular response to nitrogen starvation; GO:0007165 signal transduction; GO:0008426 protein kinase C inhibitor activity; GO:0009409 response to cold; GO:0009505 plant-type cell wall; GO:0009506 plasmodesma; GO:0009507 chloroplast; GO:0009536 plastid; GO:0009570 chloroplast stroma; GO:0009631 cold acclimation; GO:0010468 regulation of gene expression; GO:0016036 cellular response to phosphate starvation; GO:0019222 regulation of metabolic process; GO:0019904 protein domain specific binding; GO:0043130 ubiquitin binding; GO:0044877 protein-containing complex binding; GO:0045309 protein phosphorylated amino acid binding; GO:0046982 protein heterodimerization activity; GO:0050826 response to freezing; GO:0051117 ATPase binding; GO:0051365 cellular response to potassium ion starvation; GO:0090378 seed trichome elongation; GO:0140297 DNA-binding transcription factor binding
KEGG
KO: K06630 | BRITE: 00001, 03400, 04147
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.