Feature identity
- Identifier
- Pa01g1952
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 21,205 bp
- Genomic location
- Pa01:30,111,371–30,132,575
- Strand
- +
West Indian T2T · gene
Pa01g1952
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 21,205
- bp
- Pa01:30,111,371–30,132,575
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC104590318 | Seed ortholog: 337451.A0A3S3MHC7 | COG: S | eggNOG OG: VDE@131567|A-1*, VDE@2759|C-2
- Gene Ontology
- GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005829 cytosol; GO:0006631 fatty acid metabolic process; GO:0009408 response to heat; GO:0009507 chloroplast; GO:0009534 chloroplast thylakoid; GO:0009543 chloroplast thylakoid lumen; GO:0010028 xanthophyll cycle; GO:0015994 chlorophyll metabolic process; GO:0016122 xanthophyll metabolic process; GO:0019904 protein domain specific binding; GO:0030095 chloroplast photosystem II; GO:0031977 thylakoid lumen; GO:0046422 violaxanthin de-epoxidase activity
- KEGG
- EC: ec:1.23.5.1 | KO: K09839 | Pathway: 00906, 01100, 01110 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa01g1952.1
part_ofgenePa01g1952
mRNAPa01g1952.2
part_ofgenePa01g1952
