Feature identity
- Identifier
- Pa01g2126
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 6,420 bp
- Genomic location
- Pa01:36,826,239–36,832,658
- Strand
- −
West Indian T2T · gene
Pa01g2126
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 6,420
- bp
- Pa01:36,826,239–36,832,658
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC104245655 | Seed ortholog: 337451.A0A3S3NI11 | COG: S | eggNOG OG: zf-B_box@2759|B-2!, zf-B_box@3193|BT-10, zf-B_box@3398|KY-15, zf-B_box@35493|AC-8
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003712 transcription coregulator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0008270 zinc ion binding; GO:0009416 response to light stimulus; GO:0009640 photomorphogenesis; GO:0009641 shade avoidance; GO:0009658 chloroplast organization; GO:0009718 anthocyanin-containing compound biosynthetic process; GO:0009741 response to brassinosteroid; GO:0009908 flower development; GO:0009909 regulation of flower development; GO:0010018 far-red light signaling pathway; GO:0010099 regulation of photomorphogenesis; GO:0010100 negative regulation of photomorphogenesis; GO:0010117 photoprotection; GO:0010161 red light signaling pathway; GO:0010218 response to far red light; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0015995 chlorophyll biosynthetic process; GO:0016607 nuclear speck; GO:0030674 protein-macromolecule adaptor activity; GO:0032922 circadian regulation of gene expression; GO:0042802 identical protein binding; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0048571 long-day photoperiodism; GO:0048572 short-day photoperiodism; GO:0048573 photoperiodism, flowering; GO:0048576 positive regulation of short-day photoperiodism, flowering; GO:0048577 negative regulation of short-day photoperiodism, flowering; GO:0048579 negative regulation of long-day photoperiodism, flowering; GO:0070370 cellular heat acclimation; GO:0071483 cellular response to blue light; GO:0090351 seedling development; GO:1900458 negative regulation of brassinosteroid mediated signaling pathway; GO:1902448 positive regulation of shade avoidance; GO:1905157 positive regulation of photosynthesis; GO:2000306 positive regulation of photomorphogenesis
- KEGG
- KO: K12135 | Pathway: 04712 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa01g2126.1
part_ofgenePa01g2126
