Feature identity
- Identifier
- Pa01g2490
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 13,689 bp
- Genomic location
- Pa01:62,475,488–62,489,176
- Strand
- +
West Indian T2T · gene
Pa01g2490
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 13,689
- bp
- Pa01:62,475,488–62,489,176
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: WHY1 | Seed ortholog: 337451.A0A3S3MAW2 | COG: S | eggNOG OG: Whirly@131567|A-1, Whirly@2759|e-6
- Gene Ontology
- GO:0000781 chromosome, telomeric region; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003697 single-stranded DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003714 transcription corepressor activity; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006281 DNA repair; GO:0006952 defense response; GO:0009507 chloroplast; GO:0009570 chloroplast stroma; GO:0009627 systemic acquired resistance; GO:0009863 salicylic acid mediated signaling pathway; GO:0032204 regulation of telomere maintenance; GO:0032211 negative regulation of telomere maintenance via telomerase; GO:0042162 telomeric repeat DNA binding; GO:0042644 chloroplast nucleoid; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0045910 negative regulation of DNA recombination; GO:0050832 defense response to fungus; GO:1990391 DNA repair complex
- KEGG
- KO: K26559, K26560 | BRITE: 00001, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa01g2490.1
part_ofgenePa01g2490
