Computational annotationFunctional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC101507215 | Seed ortholog: 3880.A0A072UBM6 | COG: S | eggNOG OG: TBP@131567|A-1, TBP@1437183|AIg-34, TBP@2233839|AVW-37, TBP@2759|Hc-14, TBP@3398|ABc-32
- Gene Ontology
- GO:0000120 RNA polymerase I transcription regulator complex; GO:0000126 transcription factor TFIIIB complex; GO:0000785 chromatin; GO:0000791 euchromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding; GO:0000995 RNA polymerase III general transcription initiation factor activity; GO:0001003 RNA polymerase III type 2 promoter sequence-specific DNA binding; GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding; GO:0001016 RNA polymerase III transcription regulatory region sequence-specific DNA binding; GO:0001025 RNA polymerase III general transcription initiation factor binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0001091 RNA polymerase II general transcription initiation factor binding; GO:0001092 TFIIA-class transcription factor complex binding; GO:0001093 TFIIB-class transcription factor binding; GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding; GO:0001179 RNA polymerase I general transcription initiation factor binding; GO:0001181 RNA polymerase I general transcription initiation factor activity; GO:0001188 RNA polymerase I preinitiation complex assembly; GO:0001939 female pronucleus; GO:0001940 male pronucleus; GO:0003677 DNA binding; GO:0003680 minor groove of adenine-thymine-rich DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005667 transcription regulator complex; GO:0005668 RNA polymerase transcription factor SL1 complex; GO:0005669 transcription factor TFIID complex; GO:0005672 transcription factor TFIIA complex; GO:0005700 polytene chromosome; GO:0005737 cytoplasm; GO:0005783 endoplasmic reticulum; GO:0005829 cytosol; GO:0006351 DNA-templated transcription; GO:0006352 DNA-templated transcription initiation; GO:0006355 regulation of DNA-templated transcription; GO:0006361 transcription initiation at RNA polymerase I promoter; GO:0006366 transcription by RNA polymerase II; GO:0006367 transcription initiation at RNA polymerase II promoter; GO:0006383 transcription by RNA polymerase III; GO:0006384 transcription initiation at RNA polymerase III promoter; GO:0006402 mRNA catabolic process; GO:0007283 spermatogenesis; GO:0007369 gastrulation; GO:0008301 DNA binding, bending; GO:0009792 embryo development ending in birth or egg hatching; GO:0009880 embryonic pattern specification; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0017162 aryl hydrocarbon receptor binding; GO:0019899 enzyme binding; GO:0030097 hemopoiesis; GO:0032991 protein-containing complex; GO:0042789 mRNA transcription by RNA polymerase II; GO:0042790 nucleolar large rRNA transcription by RNA polymerase I; GO:0042795 snRNA transcription by RNA polymerase II; GO:0042796 snRNA transcription by RNA polymerase III; GO:0042797 tRNA transcription by RNA polymerase III; GO:0042802 identical protein binding; GO:0045120 pronucleus; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0045945 positive regulation of transcription by RNA polymerase III; GO:0051123 RNA polymerase II preinitiation complex assembly; GO:0060261 positive regulation of transcription initiation by RNA polymerase II; GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding; GO:0070898 RNA polymerase III preinitiation complex assembly; GO:0090575 RNA polymerase II transcription regulator complex; GO:0097718 disordered domain specific binding; GO:0140296 general transcription initiation factor binding; GO:0140297 DNA-binding transcription factor binding
- KEGG
- KO: K03120 | Pathway: 03022 | BRITE: 00001, 03000, 03021