West Indian T2T · gene

Pa01g4266

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

999
bp
Pa01:93,767,395–93,768,393
genomic location
Record overview

Feature identity

Identifier
Pa01g4266
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
999 bp
Genomic location
Pa01:93,767,395–93,768,393
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC116207915 | Seed ortholog: 337451.A0A443NSA7 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AhB-29, Myb_DNA-binding@3398|LSn-44, Myb_DNA-binding@58023|JFj-42
Gene Ontology
GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0001935 endothelial cell proliferation; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009555 pollen development; GO:0009737 response to abscisic acid; GO:0009834 plant-type secondary cell wall biogenesis; GO:0010199 organ boundary specification between lateral organs and the meristem; GO:0016607 nuclear speck; GO:0042803 protein homodimerization activity; GO:0045893 positive regulation of DNA-templated transcription; GO:0048579 negative regulation of long-day photoperiodism, flowering; GO:0051782 negative regulation of cell division; GO:0071367 cellular response to brassinosteroid stimulus; GO:0080060 integument development; GO:0080113 regulation of seed growth; GO:1901347 negative regulation of secondary cell wall biogenesis; GO:1901348 positive regulation of secondary cell wall biogenesis; GO:1902074 response to salt; GO:1904961 quiescent center organization; GO:2000652 regulation of secondary cell wall biogenesis
KEGG
KO: K09422 | BRITE: 00001, 03000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.