West Indian T2T · gene

Pa02g0658

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

4,007
bp
Pa02:10,320,302–10,324,308
genomic location
Record overview

Feature identity

Identifier
Pa02g0658
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
4,007 bp
Genomic location
Pa02:10,320,302–10,324,308
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC101513739 | Seed ortholog: 337451.A0A443N1G8 | COG: S | eggNOG OG: CRAL_TRIO@131567|A-1*, CRAL_TRIO@2759|ME-12!, CRAL_TRIO@3193|DCN-27, CRAL_TRIO_N@131567|A-1*, CRAL_TRIO_N@2759|Ao-8, CRAL_TRIO_N@3193|AMN-22
Gene Ontology
GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005628 prospore membrane; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005768 endosome; GO:0005811 lipid droplet; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006658 phosphatidylserine metabolic process; GO:0008150 biological_process; GO:0008526 phosphatidylinositol transfer activity; GO:0008654 phospholipid biosynthetic process; GO:0009410 response to xenobiotic stimulus; GO:0010008 endosome membrane; GO:0015914 phospholipid transport; GO:0016126 sterol biosynthetic process; GO:0032934 sterol binding; GO:0035091 phosphatidylinositol binding; GO:0042802 identical protein binding; GO:0043001 Golgi to plasma membrane protein transport; GO:0043942 negative regulation of sexual sporulation resulting in formation of a cellular spore; GO:0071466 cellular response to xenobiotic stimulus; GO:0071561 nucleus-vacuole junction; GO:0071944 cell periphery; GO:0120010 intermembrane phospholipid transfer; GO:0120014 phospholipid transfer activity; GO:1901352 negative regulation of phosphatidylglycerol biosynthetic process; GO:1902556 phosphatidylinositol transporter complex; GO:2001247 positive regulation of phosphatidylcholine biosynthetic process
KEGG
EC: ec:2.7.1.78 | KO: K26544 | Pathway: 03015 | BRITE: 00001, 02000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.