West Indian T2T · gene

Pa02g0775

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

15,756
bp
Pa02:12,032,049–12,047,804
genomic location
Record overview

Feature identity

Identifier
Pa02g0775
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
15,756 bp
Genomic location
Pa02:12,032,049–12,047,804
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: MYB3R4 | Seed ortholog: 337451.A0A3S3PS18 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AWj-28, Myb_DNA-binding@2759|AhA-29
Gene Ontology
GO:0000976 transcription cis-regulatory region binding; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005819 spindle; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0009524 phragmoplast; GO:0009620 response to fungus; GO:0009751 response to salicylic acid; GO:0032465 regulation of cytokinesis; GO:0032875 regulation of DNA endoreduplication; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:0050832 defense response to fungus; GO:0070176 DRM complex; GO:1901181 negative regulation of cellular response to caffeine
KEGG
KO: K09420 | Pathway: 04151, 04218 | BRITE: 00001, 03000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.