West Indian T2T · gene

Pa02g0969

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

6,023
bp
Pa02:15,385,719–15,391,741
genomic location
Record overview

Feature identity

Identifier
Pa02g0969
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
6,023 bp
Genomic location
Pa02:15,385,719–15,391,741
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: ALA4 | Seed ortholog: 4432.A0A1U7YQC3 | COG: S | eggNOG OG: Cation_ATPase@131567|C-2, Cation_ATPase@2759|Xc-18, Cation_ATPase@3193|Bkp-30, Cation_ATPase@33090|ATe-24, Cation_ATPase@3398|CeY-33, PhoLip_ATPase_C@131567|A-1*, PhoLip_ATPase_C@2759|Ei-11!, PhoLip_ATPase_C@3193|sI-23, PhoLip_ATPase_C@33090|SO-17, PhoLip_ATPase_C@3398|AJX-26, PhoLip_ATPase_N@131567|A-1*, PhoLip_ATPase_N@2759|EJ-11, PhoLip_ATPase_N@3193|xI-24, PhoLip_ATPase_N@33090|Tk-18, PhoLip_ATPase_N@3398|ALd-26
Gene Ontology
GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005886 plasma membrane; GO:0008270 zinc ion binding; GO:0009860 pollen tube growth; GO:0010286 heat acclimation; GO:0012505 endomembrane system; GO:0019216 regulation of lipid metabolic process; GO:0140327 flippase activity; GO:1901703 protein localization involved in auxin polar transport
KEGG
EC: ec:7.6.2.1 | KO: K01530 | Pathway: 04148 | BRITE: 00001, 01000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.