West Indian T2T · gene

Pa02g1187

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

10,783
bp
Pa02:18,635,064–18,645,846
genomic location
Record overview

Feature identity

Identifier
Pa02g1187
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
10,783 bp
Genomic location
Pa02:18,635,064–18,645,846
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: TKPR1 | Seed ortholog: 337451.A0A443N2L3 | COG: COG0451 | eggNOG OG: Epimerase@131567|KJ-12, Epimerase@3398|VOO-33, Epimerase@58023|MrU-29
Gene Ontology
GO:0004022 alcohol dehydrogenase (NAD+) activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0008106 alcohol dehydrogenase (NADP+) activity; GO:0009407 toxin catabolic process; GO:0009555 pollen development; GO:0009646 response to absence of light; GO:0009718 anthocyanin-containing compound biosynthetic process; GO:0009813 flavonoid biosynthetic process; GO:0009964 negative regulation of flavonoid biosynthetic process; GO:0010422 regulation of brassinosteroid biosynthetic process; GO:0010584 pollen exine formation; GO:0016131 brassinosteroid metabolic process; GO:0016491 oxidoreductase activity; GO:0016621 cinnamoyl-CoA reductase (NADP+) activity; GO:0016854 racemase and epimerase activity; GO:0033729 anthocyanidin reductase activity; GO:0043473 pigmentation; GO:0045552 dihydroflavanol 4-reductase activity; GO:0048316 seed development; GO:0050661 NADP binding; GO:0050832 defense response to fungus; GO:0080110 sporopollenin biosynthetic process; GO:0102386 phenylacetaldehyde reductase activity
KEGG
EC: ec:1.2.1.44 | KO: K09753 | Pathway: 00940, 01100, 01110 | Module: M00039 | BRITE: 00001, 01000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.