West Indian T2T · gene

Pa02g1511

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

7,158
bp
Pa02:25,956,374–25,963,531
genomic location
Record overview

Feature identity

Identifier
Pa02g1511
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
7,158 bp
Genomic location
Pa02:25,956,374–25,963,531
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: DNAJ1 | Seed ortholog: 337451.A0A443N339 | COG: S | eggNOG OG: DnaJ@131567|Cwn-23, DnaJ@2759|MXw-33, DnaJ@3398|dxe-44, DnaJ@35493|YnC-41, DnaJ_C@131567|B-2, DnaJ_C@1437183|AbX-23, DnaJ_C@3398|AET-21, DnaJ_C@35493|ej-18
Gene Ontology
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001671 ATPase activator activity; GO:0002088 lens development in camera-type eye; GO:0002236 detection of misfolded protein; GO:0003341 cilium movement; GO:0003351 epithelial cilium movement involved in extracellular fluid movement; GO:0003714 transcription corepressor activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0006413 translational initiation; GO:0006457 protein folding; GO:0006986 response to unfolded protein; GO:0007618 mating; GO:0008150 biological_process; GO:0009267 cellular response to starvation; GO:0009408 response to heat; GO:0010608 post-transcriptional regulation of gene expression; GO:0030317 flagellated sperm motility; GO:0030544 Hsp70 protein binding; GO:0034605 cellular response to heat; GO:0035719 tRNA import into nucleus; GO:0042026 protein refolding; GO:0042691 positive regulation of crystal cell differentiation; GO:0044183 protein folding chaperone; GO:0050821 protein stabilization; GO:0051087 protein-folding chaperone binding; GO:0051117 ATPase binding; GO:0051787 misfolded protein binding; GO:0070843 misfolded protein transport; GO:0071630 nuclear protein quality control by the ubiquitin-proteasome system; GO:0072671 mitochondria-associated ubiquitin-dependent protein catabolic process; GO:0090084 negative regulation of inclusion body assembly; GO:0140297 DNA-binding transcription factor binding; GO:0140455 cytoplasm protein quality control; GO:1903334 positive regulation of protein folding; GO:1904158 axonemal central apparatus assembly
KEGG
KO: K09510 | Pathway: 04141, 05164 | BRITE: 00001, 03110
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.