West Indian T2T · gene

Pa02g2069

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

84,364
bp
Pa02:46,284,681–46,369,044
genomic location
Record overview

Feature identity

Identifier
Pa02g2069
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
84,364 bp
Genomic location
Pa02:46,284,681–46,369,044
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC110796424 | Seed ortholog: 218851.A0A2G5E0X1 | COG: S | eggNOG OG: CH@131567|A-1*, CH@1437183|AjM-22, CH@2759|HS-11, CH@33090|ACH-19, Kinesin@131567|A-1*, Kinesin@2759|Bid-19, Kinesin@3193|Jja-32, Kinesin@3398|MEU-35
Gene Ontology
GO:0001525 angiogenesis; GO:0001568 blood vessel development; GO:0001935 endothelial cell proliferation; GO:0002244 hematopoietic progenitor cell differentiation; GO:0003774 cytoskeletal motor activity; GO:0003777 microtubule motor activity; GO:0005085 guanyl-nucleotide exchange factor activity; GO:0005096 GTPase activator activity; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding; GO:0005634 nucleus; GO:0006915 apoptotic process; GO:0007017 microtubule-based process; GO:0007018 microtubule-based movement; GO:0007030 Golgi organization; GO:0007057 spindle assembly involved in female meiosis I; GO:0007059 chromosome segregation; GO:0007143 female meiotic nuclear division; GO:0007165 signal transduction; GO:0007254 JNK cascade; GO:0007264 small GTPase-mediated signal transduction; GO:0007266 Rho protein signal transduction; GO:0007601 visual perception; GO:0008150 biological_process; GO:0008569 minus-end-directed microtubule motor activity; GO:0010608 post-transcriptional regulation of gene expression; GO:0010763 positive regulation of fibroblast migration; GO:0019901 protein kinase binding; GO:0030032 lamellipodium assembly; GO:0030587 sorocarp development; GO:0031116 positive regulation of microtubule polymerization; GO:0031152 aggregation involved in sorocarp development; GO:0031267 small GTPase binding; GO:0032837 distributive segregation; GO:0042802 identical protein binding; GO:0043008 ATP-dependent protein binding; GO:0043015 gamma-tubulin binding; GO:0043065 positive regulation of apoptotic process; GO:0043547 positive regulation of GTPase activity; GO:0043615 astrocyte cell migration; GO:0045132 meiotic chromosome segregation; GO:0045218 zonula adherens maintenance; GO:0048013 ephrin receptor signaling pathway; GO:0048041 focal adhesion assembly; GO:0051010 microtubule plus-end binding; GO:0051296 establishment of meiotic spindle orientation; GO:0051304 chromosome separation; GO:0055113 epiboly involved in gastrulation with mouth forming second; GO:0060124 positive regulation of growth hormone secretion; GO:0071896 protein localization to adherens junction; GO:0090136 epithelial cell-cell adhesion; GO:0098974 postsynaptic actin cytoskeleton organization; GO:0099140 presynaptic actin cytoskeleton organization; GO:1900026 positive regulation of substrate adhesion-dependent cell spreading; GO:1905833 negative regulation of microtubule nucleation; GO:2000394 positive regulation of lamellipodium morphogenesis
KEGG
KO: K10406 | Pathway: 04814 | BRITE: 00001, 04812
Biological context

Connected feature records

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